Detail information of GWHGAAZE006922


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrXP_007211904.11.5139E-133hypothetical protein PRUPE_ppa010411mg [Prunus persica]
Swissprottr|F4JJE5|PSA4B_ARATH4E-133Putative proteasome subunit alpha type-4-B
trEMBLtr|M5WUT5|M5WUT5_PRUPE6E-134Proteasome subunit alpha type {ECO:0000256|RuleBase:RU000551}
TAIR10AT4G15165.13E-97N-terminal nucleophile aminohydrolases (Ntn hydrolases) superfamily protein

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000002gene3425529534256044-
GWHAAZE00000002mRNA3425529534256044-
GWHAAZE00000002exon3425575934256044-
GWHAAZE00000002exon3425529534255632-
GWHAAZE00000002CDS3425575934256044-
GWHAAZE00000002CDS3425529534255632-
Transcript Sequence

Network for GWHGAAZE006922

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF10584.10Proteasome_A_N5271.30E-13
PF00227.27Proteasome971721.20E-19
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K02728PSMA4 Proteasome map03050

Gene Ontology

GO term OntologyName
GO:0051603biological_processproteolysis involved in cellular protein catabolic process
GO:0006511biological_processubiquitin-dependent protein catabolic process
GO:0005839cellular_componentproteasome core complex
GO:0019773cellular_componentproteasome core complex, alpha-subunit complex
GO:0004298molecular_functionthreonine-type endopeptidase activity
GO:0004175molecular_functionendopeptidase activity

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf352.940
SRR3591706second leaf286.865
SRR3591707mature leaf224.207
SRR3591708Shoot apex444.985
SRR3591709Stem319.906
SRR3591710White floral bud294.862
SRR3591711White flower379.701
SRR3591712Green floral bud328.888
SRR3591713Yellow flower353.073
SRP173429 SRR8316895Juvenile bud stage 154.011
SRR8316896Juvenile bud stage 216.091
SRR8316897Juvenile bud stage 174.511
SRR8316894Third green stage 86.347
SRR8316900Third green stage 333.089
SRR8316901Third green stage 335.989
SRR8316898Complete white stage 160.708
SRR8316899Complete white stage 410.608
SRR8316903Complete white stage 204.774
SRR8316902Silver flowering stage184.846
SRR8316904Silver flowering stage196.770
SRR8316905Silver flowering stage98.339
SRR8316906Gold flowering stage 336.769
SRR8316907Gold flowering stage 373.772
SRR8316908Gold flowering stage 573.589
SRP132670SRR6706286Control516.055
SRR6706287Light intensity 50%515.196
SRR6706288Light intensity 20%517.188
CNP0000432CNS0095592Slightly white alabastrum(diploid) 1272.583
CNS0095593Slightly white alabastrum(diploid) 2335.188
CNS0095594Slightly white alabastrum(diploid) 3252.772
CNS0095595Whole white alabastrum(diploid) 2270.759
CNS0095596Whole white alabastrum(diploid) 3296.597
CNS0095597Whole white alabastrum(diploid) 4261.516
CNS0095598Silvery flower (diploied) 1252.162
CNS0095599Silvery flower (diploied) 2256.260
CNS0095600Silvery flower (diploied) 3376.919
CNS0095601Golden flower (diploid) 1242.426
CNS0095602Golden flower (diploid) 2342.614
CNS0095603Golden flower (diploid) 3323.919
CNS0095604Slightly white alabastrum(tetraploid) 1266.253
CNS0095605Slightly white alabastrum(tetraploid) 2244.612
CNS0095606Slightly white alabastrum(tetraploid) 3341.031
CNS0095607Whole white alabastrum(tetraploid) 1214.254
CNS0095608Whole white alabastrum(tetraploid) 2207.125
CNS0095609Whole white alabastrum(tetraploid) 3321.431
CNS0095610Silvery flower (tetraploid) 1387.788
CNS0095611Silvery flower (tetraploid) 2338.917
CNS0095612Silvery flower (tetraploid) 3322.655
CNS0095613Golden flower (tetraploid) 1299.375
CNS0095614Golden flower (tetraploid) 2334.071
CNS0095615Golden flower (tetraploid) 3383.082
CRA001975CRR073297Stem 1286.402
CRR073298Stem 2307.029
CRR073299Stem 3421.811
CRR073300Leaf 1385.365
CRR073301Leaf 2423.616
CRR073302Leaf 3470.677
CRR073303Juvenile bud 1486.707
CRR073304Juvenile bud 2515.362
CRR073305Juvenile bud 3518.830
CRR073306Third green 1439.312
CRR073307Third green 2408.241
CRR073308Third green 3385.869
CRR073309Second white 1471.312
CRR073310Second white 2354.212
CRR073311Second white 3296.888
CRR073312Silver flowering 1359.547
CRR073313Silver flowering 2485.164
CRR073314Silver flowering 3372.687
CRR073315Gold flowering 1208.040
CRR073316Gold flowering 2223.935
CRR073317Gold flowering 3247.280
CRR073318Tawny withering 1333.488
CRR073319Tawny withering 2270.558
CRR073320Tawny withering 3307.888