Detail information of GWHGAAZE006907


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrXP_010260866.13.7738E-153PREDICTED: membrane-bound transcription factor site-2 protease isoform X1 [Nelumbo nucifera]
trEMBLtr|A0A061F386|A0A061F386_THECC3E-149Protease m50 membrane-bound transcription factor site 2 protease, putative {ECO:0000313|EMBL:EOY11511.1}
TAIR10AT4G20310.32E-81Peptidase M50 family protein

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000002gene3402752834031864-
GWHAAZE00000002mRNA3402752834031864-
GWHAAZE00000002exon3403175434031864-
GWHAAZE00000002exon3403060834030777-
GWHAAZE00000002exon3402969634029843-
GWHAAZE00000002exon3402931934029399-
GWHAAZE00000002exon3402842534028889-
GWHAAZE00000002exon3402752834027851-
GWHAAZE00000002CDS3403175434031864-
GWHAAZE00000002CDS3403060834030777-
GWHAAZE00000002CDS3402969634029843-
GWHAAZE00000002CDS3402931934029399-
GWHAAZE00000002CDS3402842534028889-
GWHAAZE00000002CDS3402752834027851-
Transcript Sequence

Network for GWHGAAZE006907

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
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Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K07765MBTPS2 Protein processing in endoplasmic reticulum map04141

Gene Ontology

GO term OntologyName

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf18.083
SRR3591706second leaf9.753
SRR3591707mature leaf9.458
SRR3591708Shoot apex16.627
SRR3591709Stem17.955
SRR3591710White floral bud15.094
SRR3591711White flower15.270
SRR3591712Green floral bud11.164
SRR3591713Yellow flower12.550
SRP173429 SRR8316895Juvenile bud stage 11.887
SRR8316896Juvenile bud stage 16.331
SRR8316897Juvenile bud stage 7.927
SRR8316894Third green stage 7.182
SRR8316900Third green stage 11.947
SRR8316901Third green stage 12.611
SRR8316898Complete white stage 4.929
SRR8316899Complete white stage 15.068
SRR8316903Complete white stage 11.156
SRR8316902Silver flowering stage6.606
SRR8316904Silver flowering stage13.584
SRR8316905Silver flowering stage5.264
SRR8316906Gold flowering stage 13.648
SRR8316907Gold flowering stage 9.339
SRR8316908Gold flowering stage 14.429
SRP132670SRR6706286Control5.336
SRR6706287Light intensity 50%6.459
SRR6706288Light intensity 20%7.010
CNP0000432CNS0095592Slightly white alabastrum(diploid) 17.717
CNS0095593Slightly white alabastrum(diploid) 25.789
CNS0095594Slightly white alabastrum(diploid) 35.513
CNS0095595Whole white alabastrum(diploid) 26.298
CNS0095596Whole white alabastrum(diploid) 35.406
CNS0095597Whole white alabastrum(diploid) 45.619
CNS0095598Silvery flower (diploied) 111.357
CNS0095599Silvery flower (diploied) 27.394
CNS0095600Silvery flower (diploied) 312.799
CNS0095601Golden flower (diploid) 19.017
CNS0095602Golden flower (diploid) 212.417
CNS0095603Golden flower (diploid) 312.235
CNS0095604Slightly white alabastrum(tetraploid) 19.154
CNS0095605Slightly white alabastrum(tetraploid) 26.948
CNS0095606Slightly white alabastrum(tetraploid) 314.413
CNS0095607Whole white alabastrum(tetraploid) 15.049
CNS0095608Whole white alabastrum(tetraploid) 22.941
CNS0095609Whole white alabastrum(tetraploid) 38.847
CNS0095610Silvery flower (tetraploid) 117.871
CNS0095611Silvery flower (tetraploid) 219.529
CNS0095612Silvery flower (tetraploid) 322.630
CNS0095613Golden flower (tetraploid) 16.983
CNS0095614Golden flower (tetraploid) 212.219
CNS0095615Golden flower (tetraploid) 317.342
CRA001975CRR073297Stem 111.750
CRR073298Stem 210.162
CRR073299Stem 33.842
CRR073300Leaf 18.598
CRR073301Leaf 26.914
CRR073302Leaf 35.639
CRR073303Juvenile bud 12.186
CRR073304Juvenile bud 22.171
CRR073305Juvenile bud 33.390
CRR073306Third green 12.336
CRR073307Third green 22.926
CRR073308Third green 32.698
CRR073309Second white 15.020
CRR073310Second white 23.446
CRR073311Second white 35.552
CRR073312Silver flowering 15.303
CRR073313Silver flowering 22.722
CRR073314Silver flowering 34.322
CRR073315Gold flowering 11.183
CRR073316Gold flowering 23.105
CRR073317Gold flowering 31.781
CRR073318Tawny withering 14.159
CRR073319Tawny withering 25.404
CRR073320Tawny withering 37.049