Detail information of GWHGAAZE006783


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrXP_003633016.10PREDICTED: shaggy-related protein kinase eta isoform X1 [Vitis vinifera]
Swissprottr|Q39011|KSG7_ARATH0Shaggy-related protein kinase eta
trEMBLtr|D7TJN3|D7TJN3_VITVI0Putative uncharacterized protein {ECO:0000313|EMBL:CBI30705.3}
TAIR10AT4G18710.10Protein kinase superfamily protein

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000002gene3190325231909424-
GWHAAZE00000002mRNA3190325231909424-
GWHAAZE00000002exon3190325231903347-
GWHAAZE00000002exon3190388931903990-
GWHAAZE00000002exon3190532231905405-
GWHAAZE00000002exon3190614731906242-
GWHAAZE00000002exon3190632631906376-
GWHAAZE00000002exon3190648931906629-
GWHAAZE00000002exon3190749831907554-
GWHAAZE00000002exon3190763131907705-
GWHAAZE00000002exon3190778531908057-
GWHAAZE00000002exon3190814631908205-
GWHAAZE00000002exon3190858231908674-
GWHAAZE00000002exon3190941031909424-
GWHAAZE00000002CDS3190941031909424-
GWHAAZE00000002CDS3190858231908674-
GWHAAZE00000002CDS3190814631908205-
GWHAAZE00000002CDS3190778531908057-
GWHAAZE00000002CDS3190763131907705-
GWHAAZE00000002CDS3190749831907554-
GWHAAZE00000002CDS3190648931906629-
GWHAAZE00000002CDS3190632631906376-
GWHAAZE00000002CDS3190614731906242-
GWHAAZE00000002CDS3190532231905405-
GWHAAZE00000002CDS3190388931903990-
GWHAAZE00000002CDS3190325231903347-
Transcript Sequence

Network for GWHGAAZE006783

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00069.26Pkinase403242.90E-63
Protein Sequence

Gene family

Gene familysubfamily
Protein Kinases FamilyCMGC_GSK

KEGG pathway

KO Enzyme pathway mapID
K14502BIN2 Plant hormone signal transduction map04075

Gene Ontology

GO term OntologyName
GO:0006468biological_processprotein phosphorylation
GO:0004672molecular_functionprotein kinase activity
GO:0005524molecular_functionATP binding

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf113.835
SRR3591706second leaf63.296
SRR3591707mature leaf50.424
SRR3591708Shoot apex71.980
SRR3591709Stem89.533
SRR3591710White floral bud157.668
SRR3591711White flower125.048
SRR3591712Green floral bud141.251
SRR3591713Yellow flower102.038
SRP173429 SRR8316895Juvenile bud stage 34.046
SRR8316896Juvenile bud stage 45.221
SRR8316897Juvenile bud stage 25.517
SRR8316894Third green stage 32.321
SRR8316900Third green stage 84.398
SRR8316901Third green stage 85.276
SRR8316898Complete white stage 61.715
SRR8316899Complete white stage 146.177
SRR8316903Complete white stage 97.122
SRR8316902Silver flowering stage55.253
SRR8316904Silver flowering stage76.656
SRR8316905Silver flowering stage35.099
SRR8316906Gold flowering stage 101.696
SRR8316907Gold flowering stage 86.509
SRR8316908Gold flowering stage 104.257
SRP132670SRR6706286Control124.548
SRR6706287Light intensity 50%145.218
SRR6706288Light intensity 20%156.245
CNP0000432CNS0095592Slightly white alabastrum(diploid) 168.933
CNS0095593Slightly white alabastrum(diploid) 267.249
CNS0095594Slightly white alabastrum(diploid) 364.397
CNS0095595Whole white alabastrum(diploid) 262.846
CNS0095596Whole white alabastrum(diploid) 370.865
CNS0095597Whole white alabastrum(diploid) 470.618
CNS0095598Silvery flower (diploied) 150.880
CNS0095599Silvery flower (diploied) 235.650
CNS0095600Silvery flower (diploied) 398.103
CNS0095601Golden flower (diploid) 137.932
CNS0095602Golden flower (diploid) 277.412
CNS0095603Golden flower (diploid) 370.872
CNS0095604Slightly white alabastrum(tetraploid) 164.896
CNS0095605Slightly white alabastrum(tetraploid) 259.052
CNS0095606Slightly white alabastrum(tetraploid) 397.416
CNS0095607Whole white alabastrum(tetraploid) 151.195
CNS0095608Whole white alabastrum(tetraploid) 250.753
CNS0095609Whole white alabastrum(tetraploid) 387.832
CNS0095610Silvery flower (tetraploid) 186.616
CNS0095611Silvery flower (tetraploid) 290.299
CNS0095612Silvery flower (tetraploid) 3176.677
CNS0095613Golden flower (tetraploid) 149.259
CNS0095614Golden flower (tetraploid) 275.468
CNS0095615Golden flower (tetraploid) 3124.668
CRA001975CRR073297Stem 1135.960
CRR073298Stem 2129.346
CRR073299Stem 3135.727
CRR073300Leaf 1183.608
CRR073301Leaf 2189.817
CRR073302Leaf 3162.237
CRR073303Juvenile bud 1183.402
CRR073304Juvenile bud 2170.185
CRR073305Juvenile bud 3232.207
CRR073306Third green 1183.843
CRR073307Third green 2135.262
CRR073308Third green 3157.428
CRR073309Second white 1126.235
CRR073310Second white 2129.886
CRR073311Second white 3130.711
CRR073312Silver flowering 1115.881
CRR073313Silver flowering 2128.491
CRR073314Silver flowering 393.721
CRR073315Gold flowering 165.263
CRR073316Gold flowering 289.062
CRR073317Gold flowering 371.953
CRR073318Tawny withering 1116.619
CRR073319Tawny withering 290.959
CRR073320Tawny withering 3119.288