Detail information of GWHGAAZE006764


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrXP_007025273.10ATP binding protein, putative isoform 1 [Theobroma cacao]
Swissprottr|Q9FXF2|RKF1_ARATH0Probable LRR receptor-like serine/threonine-protein kinase RFK1 (Precursor)
trEMBLtr|A0A061GDD6|A0A061GDD6_THECC0ATP binding protein, putative isoform 1 {ECO:0000313|EMBL:EOY27895.1}
TAIR10AT1G29750.27E-167receptor-like kinase in flowers 1

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000002gene3157400031584165-
GWHAAZE00000002mRNA3157400031584165-
GWHAAZE00000002exon3157400031574401-
GWHAAZE00000002exon3157513131575281-
GWHAAZE00000002exon3157559031575827-
GWHAAZE00000002exon3157611831576133-
GWHAAZE00000002exon3157621531576333-
GWHAAZE00000002exon3157792631578228-
GWHAAZE00000002exon3157857731578620-
GWHAAZE00000002exon3157893331578995-
GWHAAZE00000002exon3157961631579681-
GWHAAZE00000002exon3158003831580106-
GWHAAZE00000002exon3158021331580284-
GWHAAZE00000002exon3158038231580453-
GWHAAZE00000002exon3158054331580614-
GWHAAZE00000002exon3158072731580795-
GWHAAZE00000002exon3158088431580955-
GWHAAZE00000002exon3158106231581133-
GWHAAZE00000002exon3158130131581372-
GWHAAZE00000002exon3158145731581525-
GWHAAZE00000002exon3158181631581887-
GWHAAZE00000002exon3158239131582410-
GWHAAZE00000002exon3158249831582670-
GWHAAZE00000002exon3158407231584165-
GWHAAZE00000002CDS3158407231584165-
GWHAAZE00000002CDS3158249831582670-
GWHAAZE00000002CDS3158239131582410-
GWHAAZE00000002CDS3158181631581887-
GWHAAZE00000002CDS3158145731581525-
GWHAAZE00000002CDS3158130131581372-
GWHAAZE00000002CDS3158106231581133-
GWHAAZE00000002CDS3158088431580955-
GWHAAZE00000002CDS3158072731580795-
GWHAAZE00000002CDS3158054331580614-
GWHAAZE00000002CDS3158038231580453-
GWHAAZE00000002CDS3158021331580284-
GWHAAZE00000002CDS3158003831580106-
GWHAAZE00000002CDS3157961631579681-
GWHAAZE00000002CDS3157893331578995-
GWHAAZE00000002CDS3157857731578620-
GWHAAZE00000002CDS3157792631578228-
GWHAAZE00000002CDS3157621531576333-
GWHAAZE00000002CDS3157611831576133-
GWHAAZE00000002CDS3157559031575827-
GWHAAZE00000002CDS3157513131575281-
GWHAAZE00000002CDS3157400031574401-
Transcript Sequence

Network for GWHGAAZE006764

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF11721.9Malectin3954949.20E-09
PF07714.18PK_Tyr_Ser-Thr5447215.90E-27
Protein Sequence

Gene family

Gene familysubfamily
Protein Kinases FamilyRLK-Pelle_DLSV

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0006468biological_processprotein phosphorylation
GO:0004672molecular_functionprotein kinase activity
GO:0005524molecular_functionATP binding

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf2.031
SRR3591706second leaf0.477
SRR3591707mature leaf1.940
SRR3591708Shoot apex1.696
SRR3591709Stem5.217
SRR3591710White floral bud6.599
SRR3591711White flower18.160
SRR3591712Green floral bud6.978
SRR3591713Yellow flower25.019
SRP173429 SRR8316895Juvenile bud stage 2.676
SRR8316896Juvenile bud stage 3.425
SRR8316897Juvenile bud stage 1.736
SRR8316894Third green stage 2.062
SRR8316900Third green stage 6.826
SRR8316901Third green stage 4.780
SRR8316898Complete white stage 2.105
SRR8316899Complete white stage 9.935
SRR8316903Complete white stage 5.197
SRR8316902Silver flowering stage4.488
SRR8316904Silver flowering stage7.492
SRR8316905Silver flowering stage3.350
SRR8316906Gold flowering stage 19.468
SRR8316907Gold flowering stage 10.897
SRR8316908Gold flowering stage 21.064
SRP132670SRR6706286Control2.739
SRR6706287Light intensity 50%3.350
SRR6706288Light intensity 20%3.576
CNP0000432CNS0095592Slightly white alabastrum(diploid) 12.875
CNS0095593Slightly white alabastrum(diploid) 23.092
CNS0095594Slightly white alabastrum(diploid) 32.066
CNS0095595Whole white alabastrum(diploid) 23.027
CNS0095596Whole white alabastrum(diploid) 32.745
CNS0095597Whole white alabastrum(diploid) 43.991
CNS0095598Silvery flower (diploied) 15.467
CNS0095599Silvery flower (diploied) 23.960
CNS0095600Silvery flower (diploied) 37.701
CNS0095601Golden flower (diploid) 16.011
CNS0095602Golden flower (diploid) 212.517
CNS0095603Golden flower (diploid) 310.539
CNS0095604Slightly white alabastrum(tetraploid) 13.071
CNS0095605Slightly white alabastrum(tetraploid) 22.163
CNS0095606Slightly white alabastrum(tetraploid) 35.036
CNS0095607Whole white alabastrum(tetraploid) 12.273
CNS0095608Whole white alabastrum(tetraploid) 22.354
CNS0095609Whole white alabastrum(tetraploid) 35.229
CNS0095610Silvery flower (tetraploid) 18.431
CNS0095611Silvery flower (tetraploid) 26.878
CNS0095612Silvery flower (tetraploid) 33.520
CNS0095613Golden flower (tetraploid) 17.014
CNS0095614Golden flower (tetraploid) 28.744
CNS0095615Golden flower (tetraploid) 323.939
CRA001975CRR073297Stem 12.909
CRR073298Stem 22.476
CRR073299Stem 31.351
CRR073300Leaf 14.411
CRR073301Leaf 22.291
CRR073302Leaf 32.241
CRR073303Juvenile bud 15.783
CRR073304Juvenile bud 22.980
CRR073305Juvenile bud 35.616
CRR073306Third green 10.640
CRR073307Third green 20.368
CRR073308Third green 30.576
CRR073309Second white 10.179
CRR073310Second white 20.547
CRR073311Second white 30.698
CRR073312Silver flowering 10.369
CRR073313Silver flowering 20.533
CRR073314Silver flowering 31.084
CRR073315Gold flowering 10.688
CRR073316Gold flowering 21.634
CRR073317Gold flowering 30.850
CRR073318Tawny withering 14.183
CRR073319Tawny withering 26.175
CRR073320Tawny withering 32.549