Gene detail

Detail information of GWHGAAZE006697

Functional Annotation

Database	Orthologs	E value	Annotation
Nr	XP_008225307.1	0	PREDICTED: CBL-interacting serine/threonine-protein kinase 12-like [Prunus mume]
Swissprot	tr\|Q9SN43\|CIPKC_ARATH	0	CBL-interacting serine/threonine-protein kinase 12
trEMBL	tr\|M5WHD0\|M5WHD0_PRUPE	0	Uncharacterized protein {ECO:0000313\|EMBL:EMJ13222.1}
TAIR10	AT4G18700.1	4E-167	CBL-interacting protein kinase 12

Location And Transcript Sequence (JBrowse)

Scaffold	Type	Start	End	Strand
GWHAAZE00000002	gene	30295408	30296583	-
GWHAAZE00000002	mRNA	30295408	30296583	-
GWHAAZE00000002	exon	30295768	30296583	-
GWHAAZE00000002	exon	30295408	30295728	-
GWHAAZE00000002	CDS	30295768	30296583	-
GWHAAZE00000002	CDS	30295408	30295728	-

Transcript Sequence
>GWHTAAZE006705 ACCAAAAAAGAAGGCCATCTCCACCTCTTAGGTCGATTCGAAATCGGCAAACTCCTCGGCCACGGAACCTTCGCCAAAGTCTACCAAGCTCAAAACATAAACACCAACCAAATCGTCGCCATCAAAGTAATCGACAAAGAGAAAATCCTTAAAGTCGGCCTAGTCTCCCACATCAAGCGCGAAATCGAAATCTTACGCAGAGTCCGCCACCCCAACATAGTCCAATTATTCGAAGTAATGGCCACAAAATCCAAGATCTACTTTGTCATGGAGTTTGTTAAAGGCGGTGAGTTGTTCAACAAGGTCGCTAAAGGGAGATTACAAGAAGAAAAAGCTCGAAACTACTTTCAAAATCTAGTTTCGGCTGTTGGATTTTGTCACTCTCGCGGTGTTTATCACCGAGATTTGAAACCCGAGAATATACTTGTAGATGAAAATGGTGAATTGAAGGTTTCAGATTTTGGTTTGAGTACTATTTCAGAGCAAATAAAGGGGGATGGATTGTTTCATACATTTTGCGGTACACCAGCTTATGTTGCACCTGAGGTTTTAGGGCGAAAAGGATATGATGCAGCTAAGGTGGATATTTGGTCTTGTGGTGTTATATTATTTGTGTTAATGGCGGGTTATTTACCTTTTCATGATTTAAATCTTATGGCAATGTATAAGAAGATTTATAAAGGCGAATTTCGATGCCCTAGGTGGTTTTCCCCTGCATTGAGTAAATTGTTAACTCGTTTGCTTGATATAAATCCCAAAACTAGGATTACGATCCCCGAGATTATGAACAATAGGTGGTTTAAAAAGGGGTTCAAGCTTAATGTTGATGATGATGGTATTAATTATTACTCTGAATCGGAGAGTAGAAGGAACATCCCGGTCTTGCCAAGACCGGCGAGTTTGAATGCTTTTGATATCATTTCGTTCTCACAAGGGTTTGATTTGTCGGGTTTGTTTAACGAGGGAGGTGAGGATGCTAGGTTTGTTAGTGGGGCGCCAGTGTCGAGTATTATATCCAAGTTGGAGGAGATTGCGAAGGTGGTTAGTTTTACCGTGAGGAAGAAGGATTGTAGGGTGAATTTGGAGGGAAAAGGAAGGAGCGAAGGGGCCATTGACGATTGCAGCGGAGATATTTGA

Network for GWHGAAZE006697

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF00069.26	Pkinase	13	267	6.80E-76
PF03822.15	NAF	298	354	2.80E-24

Protein Sequence

Gene family

Gene family	subfamily
Protein Kinases Family	CAMK_CAMKL-CHK1

KEGG pathway

KO	Enzyme	pathway	mapID
K07198	PRKAA, AMPK	Apelin signaling pathway	map04371
		FoxO signaling pathway	map04068
		PI3K-Akt signaling pathway	map04151
		AMPK signaling pathway	map04152
		mTOR signaling pathway	map04150
		Autophagy - animal	map04140
		Tight junction	map04530
		Insulin signaling pathway	map04910
		Glucagon signaling pathway	map04922
		Adipocytokine signaling pathway	map04920
		Oxytocin signaling pathway	map04921
		Axon regeneration	map04361
		Longevity regulating pathway	map04211
		Longevity regulating pathway - multiple species	map04213
		Circadian rhythm	map04710
		Thermogenesis	map04714

Gene Ontology

GO term	Ontology	Name
GO:0007165	biological_process	signal transduction
GO:0006468	biological_process	protein phosphorylation
GO:0004672	molecular_function	protein kinase activity
GO:0005524	molecular_function	ATP binding

Expression pattern

Expression pattern detail

SRP	Sample	Description	TPM
SRP075780	SRR3591705	youngest leaf	9.513
	SRR3591706	second leaf	7.439
	SRR3591707	mature leaf	6.824
	SRR3591708	Shoot apex	7.464
	SRR3591709	Stem	6.240
	SRR3591710	White floral bud	12.091
	SRR3591711	White flower	13.464
	SRR3591712	Green floral bud	10.821
	SRR3591713	Yellow flower	32.562
SRP173429	SRR8316895	Juvenile bud stage	6.020
	SRR8316896	Juvenile bud stage	8.761
	SRR8316897	Juvenile bud stage	3.350
	SRR8316894	Third green stage	4.277
	SRR8316900	Third green stage	13.862
	SRR8316901	Third green stage	10.465
	SRR8316898	Complete white stage	11.501
	SRR8316899	Complete white stage	17.398
	SRR8316903	Complete white stage	20.179
	SRR8316902	Silver flowering stage	10.843
	SRR8316904	Silver flowering stage	18.783
	SRR8316905	Silver flowering stage	9.936
	SRR8316906	Gold flowering stage	22.415
	SRR8316907	Gold flowering stage	25.702
	SRR8316908	Gold flowering stage	22.017
SRP132670	SRR6706286	Control	15.343
	SRR6706287	Light intensity 50%	14.585
	SRR6706288	Light intensity 20%	12.728
CNP0000432	CNS0095592	Slightly white alabastrum(diploid) 1	7.200
	CNS0095593	Slightly white alabastrum(diploid) 2	6.331
	CNS0095594	Slightly white alabastrum(diploid) 3	7.162
	CNS0095595	Whole white alabastrum(diploid) 2	5.080
	CNS0095596	Whole white alabastrum(diploid) 3	4.496
	CNS0095597	Whole white alabastrum(diploid) 4	6.385
	CNS0095598	Silvery flower (diploied) 1	6.965
	CNS0095599	Silvery flower (diploied) 2	8.617
	CNS0095600	Silvery flower (diploied) 3	17.368
	CNS0095601	Golden flower (diploid) 1	6.555
	CNS0095602	Golden flower (diploid) 2	23.349
	CNS0095603	Golden flower (diploid) 3	22.346
	CNS0095604	Slightly white alabastrum(tetraploid) 1	6.864
	CNS0095605	Slightly white alabastrum(tetraploid) 2	4.573
	CNS0095606	Slightly white alabastrum(tetraploid) 3	13.237
	CNS0095607	Whole white alabastrum(tetraploid) 1	4.622
	CNS0095608	Whole white alabastrum(tetraploid) 2	2.998
	CNS0095609	Whole white alabastrum(tetraploid) 3	11.966
	CNS0095610	Silvery flower (tetraploid) 1	24.653
	CNS0095611	Silvery flower (tetraploid) 2	16.815
	CNS0095612	Silvery flower (tetraploid) 3	27.788
	CNS0095613	Golden flower (tetraploid) 1	29.199
	CNS0095614	Golden flower (tetraploid) 2	31.819
	CNS0095615	Golden flower (tetraploid) 3	53.405
CRA001975	CRR073297	Stem 1	11.039
	CRR073298	Stem 2	10.769
	CRR073299	Stem 3	7.252
	CRR073300	Leaf 1	10.603
	CRR073301	Leaf 2	10.202
	CRR073302	Leaf 3	8.589
	CRR073303	Juvenile bud 1	6.677
	CRR073304	Juvenile bud 2	11.023
	CRR073305	Juvenile bud 3	11.151
	CRR073306	Third green 1	19.829
	CRR073307	Third green 2	18.429
	CRR073308	Third green 3	18.941
	CRR073309	Second white 1	14.110
	CRR073310	Second white 2	20.288
	CRR073311	Second white 3	15.445
	CRR073312	Silver flowering 1	39.618
	CRR073313	Silver flowering 2	40.162
	CRR073314	Silver flowering 3	61.083
	CRR073315	Gold flowering 1	1.012
	CRR073316	Gold flowering 2	1.695
	CRR073317	Gold flowering 3	0.875
	CRR073318	Tawny withering 1	5.041
	CRR073319	Tawny withering 2	5.959
	CRR073320	Tawny withering 3	6.498