Detail information of GWHGAAZE006639


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrXP_002279692.14.60297E-80PREDICTED: ethylene-responsive transcription factor 4 [Vitis vinifera]
Swissprottr|Q9LW49|ERF4_NICSY7E-51Ethylene-responsive transcription factor 4
trEMBLtr|A5B2K5|A5B2K5_VITVI2E-80Putative uncharacterized protein {ECO:0000313|EMBL:CAN74093.1}
TAIR10AT3G15210.11E-20ethylene responsive element binding factor 4

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000002gene2917466629175397-
GWHAAZE00000002mRNA2917466629175397-
GWHAAZE00000002exon2917466629175397-
GWHAAZE00000002CDS2917466629175397-
Transcript Sequence

Network for GWHGAAZE006639

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00847.21AP223723.20E-15
Protein Sequence

Gene family

Gene familysubfamily
Transcription Factors FamilyAP2/ERF-ERF

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0006355biological_processregulation of transcription, DNA-templated
GO:0003700molecular_functionDNA-binding transcription factor activity
GO:0003677molecular_functionDNA binding

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf111.985
SRR3591706second leaf31.689
SRR3591707mature leaf36.312
SRR3591708Shoot apex85.998
SRR3591709Stem210.225
SRR3591710White floral bud193.126
SRR3591711White flower303.815
SRR3591712Green floral bud61.160
SRR3591713Yellow flower200.003
SRP173429 SRR8316895Juvenile bud stage 114.778
SRR8316896Juvenile bud stage 65.596
SRR8316897Juvenile bud stage 69.710
SRR8316894Third green stage 26.788
SRR8316900Third green stage 39.322
SRR8316901Third green stage 86.753
SRR8316898Complete white stage 25.089
SRR8316899Complete white stage 369.787
SRR8316903Complete white stage 32.060
SRR8316902Silver flowering stage82.734
SRR8316904Silver flowering stage64.991
SRR8316905Silver flowering stage41.989
SRR8316906Gold flowering stage 220.607
SRR8316907Gold flowering stage 200.604
SRR8316908Gold flowering stage 206.012
SRP132670SRR6706286Control17.377
SRR6706287Light intensity 50%16.034
SRR6706288Light intensity 20%14.922
CNP0000432CNS0095592Slightly white alabastrum(diploid) 1159.080
CNS0095593Slightly white alabastrum(diploid) 2152.851
CNS0095594Slightly white alabastrum(diploid) 3181.442
CNS0095595Whole white alabastrum(diploid) 2123.071
CNS0095596Whole white alabastrum(diploid) 325.035
CNS0095597Whole white alabastrum(diploid) 4118.617
CNS0095598Silvery flower (diploied) 1542.269
CNS0095599Silvery flower (diploied) 2351.671
CNS0095600Silvery flower (diploied) 3310.585
CNS0095601Golden flower (diploid) 1495.631
CNS0095602Golden flower (diploid) 2431.435
CNS0095603Golden flower (diploid) 3408.410
CNS0095604Slightly white alabastrum(tetraploid) 123.002
CNS0095605Slightly white alabastrum(tetraploid) 218.697
CNS0095606Slightly white alabastrum(tetraploid) 323.339
CNS0095607Whole white alabastrum(tetraploid) 125.442
CNS0095608Whole white alabastrum(tetraploid) 226.515
CNS0095609Whole white alabastrum(tetraploid) 318.833
CNS0095610Silvery flower (tetraploid) 1125.167
CNS0095611Silvery flower (tetraploid) 2110.169
CNS0095612Silvery flower (tetraploid) 3149.534
CNS0095613Golden flower (tetraploid) 1133.314
CNS0095614Golden flower (tetraploid) 2156.259
CNS0095615Golden flower (tetraploid) 3150.999
CRA001975CRR073297Stem 1186.369
CRR073298Stem 2196.753
CRR073299Stem 3330.335
CRR073300Leaf 1224.375
CRR073301Leaf 2331.133
CRR073302Leaf 3194.228
CRR073303Juvenile bud 1235.082
CRR073304Juvenile bud 2391.319
CRR073305Juvenile bud 3351.086
CRR073306Third green 1296.248
CRR073307Third green 2297.992
CRR073308Third green 3266.607
CRR073309Second white 1280.856
CRR073310Second white 2236.321
CRR073311Second white 3176.634
CRR073312Silver flowering 1350.278
CRR073313Silver flowering 2352.737
CRR073314Silver flowering 3295.116
CRR073315Gold flowering 1144.143
CRR073316Gold flowering 2216.151
CRR073317Gold flowering 3252.545
CRR073318Tawny withering 1268.834
CRR073319Tawny withering 2702.677
CRR073320Tawny withering 3431.157