Detail information of GWHGAAZE006508


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrXP_009802848.10PREDICTED: 5'-adenylylsulfate reductase 1, chloroplastic-like [Nicotiana sylvestris]
Swissprottr|P92980|APR3_ARATH05'-adenylylsulfate reductase 3, chloroplastic (Precursor)
trEMBLtr|M1BD45|M1BD45_SOLTU0Uncharacterized protein {ECO:0000313|EnsemblPlants:PGSC0003DMT400042488}
TAIR10AT4G04610.10APS reductase 1

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000002gene2674486126747679-
GWHAAZE00000002mRNA2674486126747679-
GWHAAZE00000002exon2674755926747679-
GWHAAZE00000002exon2674729026747445-
GWHAAZE00000002exon2674632426746450-
GWHAAZE00000002exon2674541726746209-
GWHAAZE00000002exon2674486126745220-
GWHAAZE00000002five_prime_UTR2674764126747679-
GWHAAZE00000002CDS2674755926747640-
GWHAAZE00000002CDS2674729026747445-
GWHAAZE00000002CDS2674632426746450-
GWHAAZE00000002CDS2674541726746209-
GWHAAZE00000002CDS2674499026745220-
GWHAAZE00000002three_prime_UTR2674486126744989-
Transcript Sequence

Network for GWHGAAZE006508

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF01507.20PAPS_reduct1172975.00E-42
PF00085.21Thioredoxin3634589.40E-14
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K05907APR Metabolic pathways map01100
Microbial metabolism in diverse environmentsmap01120
Sulfur metabolismmap00920

Gene Ontology

GO term OntologyName
GO:0019419biological_processsulfate reduction
GO:0055114biological_processoxidation-reduction process
GO:0045454biological_processcell redox homeostasis
GO:0003824molecular_functioncatalytic activity
GO:0016671molecular_functionoxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf51.144
SRR3591706second leaf637.007
SRR3591707mature leaf398.116
SRR3591708Shoot apex95.969
SRR3591709Stem59.499
SRR3591710White floral bud45.624
SRR3591711White flower75.310
SRR3591712Green floral bud47.725
SRR3591713Yellow flower153.148
SRP173429 SRR8316895Juvenile bud stage 12.583
SRR8316896Juvenile bud stage 10.899
SRR8316897Juvenile bud stage 5.512
SRR8316894Third green stage 5.178
SRR8316900Third green stage 12.750
SRR8316901Third green stage 13.504
SRR8316898Complete white stage 4.332
SRR8316899Complete white stage 28.162
SRR8316903Complete white stage 10.190
SRR8316902Silver flowering stage25.122
SRR8316904Silver flowering stage34.700
SRR8316905Silver flowering stage25.677
SRR8316906Gold flowering stage 57.354
SRR8316907Gold flowering stage 57.086
SRR8316908Gold flowering stage 77.910
SRP132670SRR6706286Control79.574
SRR6706287Light intensity 50%64.375
SRR6706288Light intensity 20%68.085
CNP0000432CNS0095592Slightly white alabastrum(diploid) 146.296
CNS0095593Slightly white alabastrum(diploid) 266.016
CNS0095594Slightly white alabastrum(diploid) 350.657
CNS0095595Whole white alabastrum(diploid) 254.611
CNS0095596Whole white alabastrum(diploid) 334.131
CNS0095597Whole white alabastrum(diploid) 449.811
CNS0095598Silvery flower (diploied) 194.168
CNS0095599Silvery flower (diploied) 277.085
CNS0095600Silvery flower (diploied) 373.022
CNS0095601Golden flower (diploid) 156.266
CNS0095602Golden flower (diploid) 270.816
CNS0095603Golden flower (diploid) 367.381
CNS0095604Slightly white alabastrum(tetraploid) 153.012
CNS0095605Slightly white alabastrum(tetraploid) 270.847
CNS0095606Slightly white alabastrum(tetraploid) 3188.347
CNS0095607Whole white alabastrum(tetraploid) 143.479
CNS0095608Whole white alabastrum(tetraploid) 231.803
CNS0095609Whole white alabastrum(tetraploid) 367.328
CNS0095610Silvery flower (tetraploid) 1180.323
CNS0095611Silvery flower (tetraploid) 2177.010
CNS0095612Silvery flower (tetraploid) 3143.485
CNS0095613Golden flower (tetraploid) 163.420
CNS0095614Golden flower (tetraploid) 282.013
CNS0095615Golden flower (tetraploid) 385.631
CRA001975CRR073297Stem 112.780
CRR073298Stem 213.698
CRR073299Stem 315.799
CRR073300Leaf 110.946
CRR073301Leaf 210.635
CRR073302Leaf 314.552
CRR073303Juvenile bud 117.578
CRR073304Juvenile bud 26.539
CRR073305Juvenile bud 328.491
CRR073306Third green 115.633
CRR073307Third green 224.060
CRR073308Third green 319.023
CRR073309Second white 1143.662
CRR073310Second white 2108.394
CRR073311Second white 3167.468
CRR073312Silver flowering 1112.255
CRR073313Silver flowering 2111.770
CRR073314Silver flowering 3118.511
CRR073315Gold flowering 171.878
CRR073316Gold flowering 265.460
CRR073317Gold flowering 354.988
CRR073318Tawny withering 117.156
CRR073319Tawny withering 225.467
CRR073320Tawny withering 36.987