Detail information of GWHGAAZE006438


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrXP_010252788.10PREDICTED: acetyl-CoA acetyltransferase, cytosolic 1 [Nelumbo nucifera]
Swissprottr|Q9FIK7|THIC2_ARATH0Probable acetyl-CoA acetyltransferase, cytosolic 2
trEMBLtr|B9HC23|B9HC23_POPTR0Truncated acetyl Co-A acetyltransferase-like family protein {ECO:0000313|EMBL:EEE92278.1}
TAIR10AT5G47720.41E-170Thiolase family protein

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000002gene2563853225649084-
GWHAAZE00000002mRNA2563853225649084-
GWHAAZE00000002exon2564904225649084-
GWHAAZE00000002exon2564864725648745-
GWHAAZE00000002exon2564836225648535-
GWHAAZE00000002exon2564816325648268-
GWHAAZE00000002exon2564752325647661-
GWHAAZE00000002exon2564700225647079-
GWHAAZE00000002exon2564684525646907-
GWHAAZE00000002exon2564661725646702-
GWHAAZE00000002exon2564602825646127-
GWHAAZE00000002exon2564583125645941-
GWHAAZE00000002exon2564570125645742-
GWHAAZE00000002exon2564533825645392-
GWHAAZE00000002exon2564509025645167-
GWHAAZE00000002exon2564022325640578-
GWHAAZE00000002exon2563962225640119-
GWHAAZE00000002exon2563930425639514-
GWHAAZE00000002exon2563853225639190-
GWHAAZE00000002CDS2564904225649084-
GWHAAZE00000002CDS2564864725648745-
GWHAAZE00000002CDS2564836225648535-
GWHAAZE00000002CDS2564816325648268-
GWHAAZE00000002CDS2564752325647661-
GWHAAZE00000002CDS2564700225647079-
GWHAAZE00000002CDS2564684525646907-
GWHAAZE00000002CDS2564661725646702-
GWHAAZE00000002CDS2564602825646127-
GWHAAZE00000002CDS2564583125645941-
GWHAAZE00000002CDS2564570125645742-
GWHAAZE00000002CDS2564533825645392-
GWHAAZE00000002CDS2564509025645167-
GWHAAZE00000002CDS2564022325640578-
GWHAAZE00000002CDS2563962225640119-
GWHAAZE00000002CDS2563930425639514-
GWHAAZE00000002CDS2563853225639190-
Transcript Sequence

Network for GWHGAAZE006438

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00108.24Thiolase_N162739.40E-91
PF02803.19Thiolase_C2833664.80E-27
PF05701.12WEMBL4677371.60E-12
PF05701.12WEMBL7549471.90E-22
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K00626ACAT, atoB Metabolic pathways map01100
Biosynthesis of secondary metabolitesmap01110
Microbial metabolism in diverse environmentsmap01120
Carbon metabolismmap01200
Fatty acid metabolismmap01212
Pyruvate metabolismmap00620
Glyoxylate and dicarboxylate metabolismmap00630
Propanoate metabolismmap00640
Butanoate metabolismmap00650
Carbon fixation pathways in prokaryotesmap00720
Fatty acid degradationmap00071
Synthesis and degradation of ketone bodiesmap00072
Valine, leucine and isoleucine degradationmap00280
Lysine degradationmap00310
Tryptophan metabolismmap00380
Terpenoid backbone biosynthesismap00900
Benzoate degradationmap00362
Two-component systemmap02020
Fat digestion and absorptionmap04975

Gene Ontology

GO term OntologyName
GO:0003824molecular_functioncatalytic activity
GO:0016747molecular_functiontransferase activity, transferring acyl groups other than amino-acyl groups

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf13.899
SRR3591706second leaf6.048
SRR3591707mature leaf9.327
SRR3591708Shoot apex7.319
SRR3591709Stem17.494
SRR3591710White floral bud21.785
SRR3591711White flower21.662
SRR3591712Green floral bud20.968
SRR3591713Yellow flower35.286
SRP173429 SRR8316895Juvenile bud stage 7.101
SRR8316896Juvenile bud stage 13.343
SRR8316897Juvenile bud stage 5.408
SRR8316894Third green stage 5.391
SRR8316900Third green stage 15.333
SRR8316901Third green stage 13.943
SRR8316898Complete white stage 10.072
SRR8316899Complete white stage 19.162
SRR8316903Complete white stage 16.436
SRR8316902Silver flowering stage10.636
SRR8316904Silver flowering stage14.635
SRR8316905Silver flowering stage7.995
SRR8316906Gold flowering stage 29.463
SRR8316907Gold flowering stage 27.671
SRR8316908Gold flowering stage 25.516
SRP132670SRR6706286Control17.467
SRR6706287Light intensity 50%17.494
SRR6706288Light intensity 20%16.921
CNP0000432CNS0095592Slightly white alabastrum(diploid) 18.423
CNS0095593Slightly white alabastrum(diploid) 26.567
CNS0095594Slightly white alabastrum(diploid) 38.827
CNS0095595Whole white alabastrum(diploid) 212.727
CNS0095596Whole white alabastrum(diploid) 311.944
CNS0095597Whole white alabastrum(diploid) 418.783
CNS0095598Silvery flower (diploied) 114.330
CNS0095599Silvery flower (diploied) 213.344
CNS0095600Silvery flower (diploied) 329.295
CNS0095601Golden flower (diploid) 113.800
CNS0095602Golden flower (diploid) 225.852
CNS0095603Golden flower (diploid) 327.783
CNS0095604Slightly white alabastrum(tetraploid) 110.162
CNS0095605Slightly white alabastrum(tetraploid) 28.863
CNS0095606Slightly white alabastrum(tetraploid) 312.519
CNS0095607Whole white alabastrum(tetraploid) 115.708
CNS0095608Whole white alabastrum(tetraploid) 222.340
CNS0095609Whole white alabastrum(tetraploid) 317.694
CNS0095610Silvery flower (tetraploid) 132.518
CNS0095611Silvery flower (tetraploid) 236.408
CNS0095612Silvery flower (tetraploid) 330.647
CNS0095613Golden flower (tetraploid) 123.587
CNS0095614Golden flower (tetraploid) 234.433
CNS0095615Golden flower (tetraploid) 339.693
CRA001975CRR073297Stem 19.416
CRR073298Stem 211.557
CRR073299Stem 37.621
CRR073300Leaf 115.749
CRR073301Leaf 211.909
CRR073302Leaf 312.297
CRR073303Juvenile bud 120.374
CRR073304Juvenile bud 221.547
CRR073305Juvenile bud 312.940
CRR073306Third green 19.706
CRR073307Third green 28.425
CRR073308Third green 37.910
CRR073309Second white 115.585
CRR073310Second white 212.435
CRR073311Second white 311.644
CRR073312Silver flowering 111.487
CRR073313Silver flowering 212.899
CRR073314Silver flowering 39.251
CRR073315Gold flowering 114.505
CRR073316Gold flowering 220.482
CRR073317Gold flowering 315.280
CRR073318Tawny withering 113.575
CRR073319Tawny withering 211.587
CRR073320Tawny withering 310.469