Gene detail

Detail information of GWHGAAZE006421

Functional Annotation

Database	Orthologs	E value	Annotation
Nr	EYU18146.1	5.8348E-166	hypothetical protein MIMGU_mgv1a003552mg [Erythranthe guttata]
Swissprot	tr\|Q39016\|CDPKB_ARATH	0	Calcium-dependent protein kinase 11
trEMBL	tr\|A0A022PQY8\|A0A022PQY8_ERYGU	2E-166	Uncharacterized protein {ECO:0000313\|EMBL:EYU18146.1}
TAIR10	AT1G35670.1	3E-166	calcium-dependent protein kinase 2

Location And Transcript Sequence (JBrowse)

Scaffold	Type	Start	End	Strand
GWHAAZE00000002	gene	25373054	25380853	+
GWHAAZE00000002	mRNA	25373054	25380853	+
GWHAAZE00000002	exon	25373054	25374006	+
GWHAAZE00000002	exon	25375499	25375692	+
GWHAAZE00000002	exon	25377106	25377249	+
GWHAAZE00000002	exon	25377359	25377511	+
GWHAAZE00000002	exon	25378028	25378143	+
GWHAAZE00000002	exon	25378348	25378515	+
GWHAAZE00000002	exon	25380611	25380853	+
GWHAAZE00000002	CDS	25373054	25374006	+
GWHAAZE00000002	CDS	25375499	25375692	+
GWHAAZE00000002	CDS	25377106	25377249	+
GWHAAZE00000002	CDS	25377359	25377511	+
GWHAAZE00000002	CDS	25378028	25378143	+
GWHAAZE00000002	CDS	25378348	25378515	+
GWHAAZE00000002	CDS	25380611	25380853	+

Transcript Sequence
>GWHTAAZE006429 ATGGGGAACATATGCCTAGGACCTAATTTGGGCAAGAATGGTTTCATACAATCCATAACAGCTGTGATTTGGCGAAGCCGACCACCAGAGAACAAACTTCCTCCTCCTAATGAAGAAGAAGCCAATAAAAGCAACAATAATAATAATAAAAATGCCAAGAAAGGGGGGGCGGTTTTGGAAAAAACTGTGAGTTCGGCTTCTTCGGCTTTTGCCTCTTCTAATAAAAATAAGGGTTCTAATGAAGAAGCCAATAGAAACAAGAATAATGCAAAACCACCAGCAGCTCCGGTCCAAAGTACACCACCCCAAACAGTTAAAATAAACGGGGAGGAGGGTAGTAAACGGGGAGGATCGTCATCATCATCAACAGTAAAGAACAGTAGCACTCATCATCATAAGCGTATGTCGAGTGTGGGACTTCAGGTCGAATCAGTGTTGCAGAGGAAAACCGGGAATCTGAAGGAGGTATATAATGTGGGGAAGAAGCTCGGGCAAGGGCAATTCGGGACCACGTACCTTTGTATAGAGAAGGCAACAGGGAAGGAGTTTGCTTGCAAAACCATTGCAAAGAGGAAGCTGGTGAGTATAGAGGATGTGGAGGATGTTAGGAGGGAGATTCAGATAATGCACCACATGGCAGGTCACCCAAACGTGATATCTATTGTAGCTGCTTATGAGGATGCCGTTGCAGTCCATGTTGTTATGGAGCTTTGTGCAGGTGGGGAACTCTTTGACAGGATTGTGAAAAAAGGGCACTACACAGAAAAGAAGGCAGCTGAACTCGCGAGGATAATAGTTGGAGTTGTGGAATCGTGCCATTCTTTAGGGGTCATGCATCGCGACTTGAAGCCCGAGAATTTTCTTTTTGTTGACGACGAGGAGGAATCGGCCCTTAAAACCATAGACTTTGGGCTCTCAATGTTCTTTAGACCAGGTAGGTATTCTTCTACAAATGGTCTTGAAAAGGCGTTCAGGGCAAGACGGATGAAAGGGCGGTGTAGGACGGGCAAGGGGAAAACGGGGCAGTGGGGGAAGGGTGTGACGCAGTGGTTGCATGATGTCAGTGGTTCGAGAGGCGGTGGCAATGGGTTTCGAATTTATGGGGAGGTGACGGAGGAGGCCGGTGGTTTTAGAGTTGGTGGTTTTGGTGAAACATTCACTGATGTGGTCGGGAGCCCTTATTATGTGGCGCCAGAGGTGTTGAAGAAATTTTATGGTCAAGAATGTGATGTTTGGAGTGCTGGGGTTATCATTTATATTTTACTTAGTGGGGTCCCTCCATTTTGGGATGAACTGGAGCAAGGAATATTTGAACAGGTTTTAAATGGGGACCTTGACTTCTCATCAGAACCATGGCCTAGCGTATCAGATAGTGCAAAAGATCTGATAAAAAAAATGCTTGTAAGAGACCCCAAAAAGCGGTTGACTGCCCATAAAGTCCTTTGCCACCCTTGGGTTCGGGTTGGTGGTGCGGCTCCTGATAAACCTCTTGATTCTGCCGTTCTAAGTCGTTTGAAGAAATTTTCTGCCATGAACAAGTTTAAGAAGATGGCTCTTAGGGTTATTGCTGAGAATCTATCTGAAGAGGAAATTGCAGGACTAAAAGAAATGTTTAAAATGATAGACACAGATAATAGTGGACAGATCACACTTGAAGAGCTGAAGAACGGTTTGGAAAGAGTGGGTGCCAATCTCAAAGATTCAGAAATCAAGAGTTTAATGCAAGCAGCAGACTTTGACAATAGTGGAACGATAGATTACAGTGAGTTTGTAGCAGCGATGATGAATCTAAACAAAGCCCAGAAGGAGGATTATATGTTTGCAGCTTTCTCTTATTTCGACAAAGATGGAAGTGGATACATCACAGCCGATGAGCTCCAACAGGCTTGTGAACAGTTTGGTTTGGGTGATGTTCACCTTGAAGATATTATCCGTGAAGTTGATCGGGATAACGTAATTAACCATGCATAA

Network for GWHGAAZE006421

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF00069.26	Pkinase	157	328	6.50E-42
PF00069.26	Pkinase	385	486	3.60E-25
PF13499.7	EF-hand_7	534	594	3.90E-13
PF13405.7	EF-hand_6	606	632	1.60E-07

Protein Sequence

Gene family

Gene family	subfamily
Protein Kinases Family	CAMK_CDPK

KEGG pathway

KO	Enzyme	pathway	mapID
K13412	CPK	Plant-pathogen interaction	map04626

Gene Ontology

GO term	Ontology	Name
GO:0006468	biological_process	protein phosphorylation
GO:0004672	molecular_function	protein kinase activity
GO:0005509	molecular_function	calcium ion binding
GO:0005524	molecular_function	ATP binding

Expression pattern

Expression pattern detail

SRP	Sample	Description	TPM
SRP075780	SRR3591705	youngest leaf	7.689
	SRR3591706	second leaf	5.726
	SRR3591707	mature leaf	5.382
	SRR3591708	Shoot apex	6.273
	SRR3591709	Stem	6.103
	SRR3591710	White floral bud	13.165
	SRR3591711	White flower	4.081
	SRR3591712	Green floral bud	14.189
	SRR3591713	Yellow flower	3.776
SRP173429	SRR8316895	Juvenile bud stage	5.011
	SRR8316896	Juvenile bud stage	7.191
	SRR8316897	Juvenile bud stage	4.884
	SRR8316894	Third green stage	4.229
	SRR8316900	Third green stage	12.474
	SRR8316901	Third green stage	11.112
	SRR8316898	Complete white stage	2.241
	SRR8316899	Complete white stage	5.568
	SRR8316903	Complete white stage	4.210
	SRR8316902	Silver flowering stage	1.377
	SRR8316904	Silver flowering stage	2.497
	SRR8316905	Silver flowering stage	1.277
	SRR8316906	Gold flowering stage	3.218
	SRR8316907	Gold flowering stage	3.062
	SRR8316908	Gold flowering stage	3.619
SRP132670	SRR6706286	Control	11.061
	SRR6706287	Light intensity 50%	11.445
	SRR6706288	Light intensity 20%	11.651
CNP0000432	CNS0095592	Slightly white alabastrum(diploid) 1	10.097
	CNS0095593	Slightly white alabastrum(diploid) 2	5.814
	CNS0095594	Slightly white alabastrum(diploid) 3	10.385
	CNS0095595	Whole white alabastrum(diploid) 2	14.662
	CNS0095596	Whole white alabastrum(diploid) 3	17.326
	CNS0095597	Whole white alabastrum(diploid) 4	19.551
	CNS0095598	Silvery flower (diploied) 1	5.245
	CNS0095599	Silvery flower (diploied) 2	2.920
	CNS0095600	Silvery flower (diploied) 3	3.525
	CNS0095601	Golden flower (diploid) 1	4.200
	CNS0095602	Golden flower (diploid) 2	3.042
	CNS0095603	Golden flower (diploid) 3	3.745
	CNS0095604	Slightly white alabastrum(tetraploid) 1	13.326
	CNS0095605	Slightly white alabastrum(tetraploid) 2	13.597
	CNS0095606	Slightly white alabastrum(tetraploid) 3	7.725
	CNS0095607	Whole white alabastrum(tetraploid) 1	22.171
	CNS0095608	Whole white alabastrum(tetraploid) 2	27.762
	CNS0095609	Whole white alabastrum(tetraploid) 3	18.248
	CNS0095610	Silvery flower (tetraploid) 1	4.078
	CNS0095611	Silvery flower (tetraploid) 2	5.436
	CNS0095612	Silvery flower (tetraploid) 3	7.520
	CNS0095613	Golden flower (tetraploid) 1	2.565
	CNS0095614	Golden flower (tetraploid) 2	3.111
	CNS0095615	Golden flower (tetraploid) 3	3.965
CRA001975	CRR073297	Stem 1	6.405
	CRR073298	Stem 2	6.272
	CRR073299	Stem 3	3.680
	CRR073300	Leaf 1	9.001
	CRR073301	Leaf 2	8.140
	CRR073302	Leaf 3	5.113
	CRR073303	Juvenile bud 1	5.880
	CRR073304	Juvenile bud 2	4.964
	CRR073305	Juvenile bud 3	2.282
	CRR073306	Third green 1	2.704
	CRR073307	Third green 2	1.949
	CRR073308	Third green 3	3.395
	CRR073309	Second white 1	0.341
	CRR073310	Second white 2	0.950
	CRR073311	Second white 3	1.245
	CRR073312	Silver flowering 1	1.179
	CRR073313	Silver flowering 2	0.908
	CRR073314	Silver flowering 3	1.795
	CRR073315	Gold flowering 1	3.055
	CRR073316	Gold flowering 2	4.775
	CRR073317	Gold flowering 3	1.039
	CRR073318	Tawny withering 1	3.904
	CRR073319	Tawny withering 2	4.438
	CRR073320	Tawny withering 3	3.727