Gene detail

Detail information of GWHGAAZE006332

Functional Annotation

Database	Orthologs	E value	Annotation
Nr	XP_007210221.1	1.6611E-153	hypothetical protein PRUPE_ppa015589mg [Prunus persica]
Swissprot	tr\|Q9LQM8\|M2K10_ARATH	4E-109	Mitogen-activated protein kinase kinase 10
trEMBL	tr\|M5WX93\|M5WX93_PRUPE	6E-154	Uncharacterized protein {ECO:0000313\|EMBL:EMJ11420.1}
TAIR10	AT1G32320.1	4E-86	MAP kinase kinase 10

Location And Transcript Sequence (JBrowse)

Scaffold	Type	Start	End	Strand
GWHAAZE00000002	gene	23448916	23449947	-
GWHAAZE00000002	mRNA	23448916	23449947	-
GWHAAZE00000002	exon	23449864	23449947	-
GWHAAZE00000002	exon	23448916	23449812	-
GWHAAZE00000002	CDS	23449864	23449947	-
GWHAAZE00000002	CDS	23448916	23449812	-

Transcript Sequence
>GWHTAAZE006340 ATGACATTGGTGAGGGAGAGAAGGCAACAAGCAGCCTTGAGGCTATCCCTACCACCACCGGTCCCCGCCACAGATTTTCGCCACTCATCGGCAAGTTCGAATTCGCCCAGTGTATTTAATCTCTCAGACCTCGAGAAACTAGCAGTTTTAGGCCACGGGTGCAGTGGCACAATCTACAAAGTTCGCCATAGGCGAAGCGGTGGGTTCTACGCATTGAAAGTTCTTCGTTTTGATGAAGATGCGGTGTCCTTTCAACAGCGAGCTGCCCATGAGGCTGAGATCCTCAAACGGATCGATTCGCCTTTTATTGTCAAGTGTCATGGGGTTTTTGATACAGATGATGGAGGTGATCTTTGCTTCCTGATGGAGTACATGGAAGTAGGATCCCTCCATGACATCTTGTGTACACGCCAGAGACTGTCTGAACAAACAATCTCCGGCGTCGCAAGACGTTTGTTGGAAGGGTTGCACTATCTTCACGCGATGCAAATAGTGCATAGAGATATCAAACCTTCCAACTTATTGATTAACATAAACTTTGAGATCAAAATCGCCGATTTTGGTGTCAGCAGGGTCGTGGGTGATGCCCGCGAGAAAAGTGAGTCCTACATGGGTACATGCGCATACATGAGCCCCGAAAGATTCGATCCGGAGAGGTGGAATGGAGAATGCTCTGATGGTTTTGCTGGAGATGTGTGGGCGCTAGGTGTGGTGGTGCTCGAGTGCCACATAGGCCATTTTCCATTGATCAGTCCAGGACAAAAGCCGGACTGGGCAACCCTAATGTGCACAATTTGCTTTGGGAGAGAGAAGGTGGAGATGCCAGAGACTGCTTCGCCGGAGTTTCGAAGTTTTGTGTGGAGGTGTTTGGAAAAAGATTGGAGATTAAGAGGGAGTTTGGAGGAGCTTCTTAATCACCCTTTTGTGACTCAATCTCACAATGGTTCCATAGAAGAGTTGGCGATGGTGGAAGTAACCTAG

Network for GWHGAAZE006332

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF00069.26	Pkinase	45	309	1.40E-58

Protein Sequence

Gene family

Gene family	subfamily
Protein Kinases Family	STE_STE7

KEGG pathway

KO	Enzyme	pathway	mapID
K20604	MKK9	MAPK signaling pathway - plant	map04016

Gene Ontology

GO term	Ontology	Name
GO:0006468	biological_process	protein phosphorylation
GO:0004672	molecular_function	protein kinase activity
GO:0005524	molecular_function	ATP binding

Expression pattern

Expression pattern detail

SRP	Sample	Description	TPM
SRP075780	SRR3591705	youngest leaf	0.050
	SRR3591706	second leaf	0.000
	SRR3591707	mature leaf	0.000
	SRR3591708	Shoot apex	0.209
	SRR3591709	Stem	0.000
	SRR3591710	White floral bud	86.566
	SRR3591711	White flower	37.611
	SRR3591712	Green floral bud	25.708
	SRR3591713	Yellow flower	14.139
SRP173429	SRR8316895	Juvenile bud stage	30.084
	SRR8316896	Juvenile bud stage	57.379
	SRR8316897	Juvenile bud stage	21.585
	SRR8316894	Third green stage	13.065
	SRR8316900	Third green stage	26.013
	SRR8316901	Third green stage	33.857
	SRR8316898	Complete white stage	39.729
	SRR8316899	Complete white stage	0.168
	SRR8316903	Complete white stage	55.781
	SRR8316902	Silver flowering stage	99.008
	SRR8316904	Silver flowering stage	165.082
	SRR8316905	Silver flowering stage	84.583
	SRR8316906	Gold flowering stage	157.354
	SRR8316907	Gold flowering stage	110.564
	SRR8316908	Gold flowering stage	70.622
SRP132670	SRR6706286	Control	13.527
	SRR6706287	Light intensity 50%	13.631
	SRR6706288	Light intensity 20%	8.613
CNP0000432	CNS0095592	Slightly white alabastrum(diploid) 1	62.509
	CNS0095593	Slightly white alabastrum(diploid) 2	42.373
	CNS0095594	Slightly white alabastrum(diploid) 3	81.965
	CNS0095595	Whole white alabastrum(diploid) 2	42.382
	CNS0095596	Whole white alabastrum(diploid) 3	59.531
	CNS0095597	Whole white alabastrum(diploid) 4	36.326
	CNS0095598	Silvery flower (diploied) 1	10.171
	CNS0095599	Silvery flower (diploied) 2	20.216
	CNS0095600	Silvery flower (diploied) 3	159.368
	CNS0095601	Golden flower (diploid) 1	17.461
	CNS0095602	Golden flower (diploid) 2	48.199
	CNS0095603	Golden flower (diploid) 3	48.346
	CNS0095604	Slightly white alabastrum(tetraploid) 1	48.691
	CNS0095605	Slightly white alabastrum(tetraploid) 2	53.647
	CNS0095606	Slightly white alabastrum(tetraploid) 3	0.097
	CNS0095607	Whole white alabastrum(tetraploid) 1	44.868
	CNS0095608	Whole white alabastrum(tetraploid) 2	25.640
	CNS0095609	Whole white alabastrum(tetraploid) 3	21.169
	CNS0095610	Silvery flower (tetraploid) 1	55.789
	CNS0095611	Silvery flower (tetraploid) 2	121.583
	CNS0095612	Silvery flower (tetraploid) 3	334.649
	CNS0095613	Golden flower (tetraploid) 1	34.602
	CNS0095614	Golden flower (tetraploid) 2	64.771
	CNS0095615	Golden flower (tetraploid) 3	76.080
CRA001975	CRR073297	Stem 1	27.381
	CRR073298	Stem 2	24.327
	CRR073299	Stem 3	19.689
	CRR073300	Leaf 1	12.962
	CRR073301	Leaf 2	22.616
	CRR073302	Leaf 3	18.539
	CRR073303	Juvenile bud 1	1.952
	CRR073304	Juvenile bud 2	1.175
	CRR073305	Juvenile bud 3	0.381
	CRR073306	Third green 1	206.923
	CRR073307	Third green 2	111.685
	CRR073308	Third green 3	124.576
	CRR073309	Second white 1	108.755
	CRR073310	Second white 2	121.780
	CRR073311	Second white 3	65.596
	CRR073312	Silver flowering 1	15.478
	CRR073313	Silver flowering 2	13.222
	CRR073314	Silver flowering 3	12.855
	CRR073315	Gold flowering 1	0.000
	CRR073316	Gold flowering 2	0.000
	CRR073317	Gold flowering 3	0.000
	CRR073318	Tawny withering 1	0.000
	CRR073319	Tawny withering 2	0.000
	CRR073320	Tawny withering 3	0.000