Detail information of GWHGAAZE006235


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrXP_004172503.11.02007E-57PREDICTED: small heat shock protein, chloroplastic-like [Cucumis sativus]
Swissprottr|P11890|HS23C_OXYRB3E-46Small heat shock protein, chloroplastic (Precursor)
trEMBLtr|V7AD41|V7AD41_PHAVU5E-52Uncharacterized protein {ECO:0000313|EMBL:ESW03462.1}
TAIR10AT4G25200.16E-34mitochondrion-localized small heat shock protein 23.6

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000002gene2163824121638606-
GWHAAZE00000002mRNA2163824121638606-
GWHAAZE00000002exon2163824121638606-
GWHAAZE00000002CDS2163824121638606-
Transcript Sequence

Network for GWHGAAZE006235

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00011.22HSP20251205.60E-19
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K13993HSP20 Protein processing in endoplasmic reticulum map04141

Gene Ontology

GO term OntologyName

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf0.000
SRR3591706second leaf0.000
SRR3591707mature leaf0.000
SRR3591708Shoot apex0.000
SRR3591709Stem0.000
SRR3591710White floral bud0.000
SRR3591711White flower0.000
SRR3591712Green floral bud0.000
SRR3591713Yellow flower0.000
SRP173429 SRR8316895Juvenile bud stage 9.191
SRR8316896Juvenile bud stage 86.455
SRR8316897Juvenile bud stage 8.110
SRR8316894Third green stage 1.601
SRR8316900Third green stage 5.650
SRR8316901Third green stage 3.253
SRR8316898Complete white stage 0.401
SRR8316899Complete white stage 2.478
SRR8316903Complete white stage 1.435
SRR8316902Silver flowering stage0.686
SRR8316904Silver flowering stage0.593
SRR8316905Silver flowering stage0.603
SRR8316906Gold flowering stage 2.838
SRR8316907Gold flowering stage 1.654
SRR8316908Gold flowering stage 1.574
SRP132670SRR6706286Control2.793
SRR6706287Light intensity 50%1.706
SRR6706288Light intensity 20%1.398
CNP0000432CNS0095592Slightly white alabastrum(diploid) 16.684
CNS0095593Slightly white alabastrum(diploid) 210.183
CNS0095594Slightly white alabastrum(diploid) 311.329
CNS0095595Whole white alabastrum(diploid) 25.541
CNS0095596Whole white alabastrum(diploid) 36.216
CNS0095597Whole white alabastrum(diploid) 44.316
CNS0095598Silvery flower (diploied) 12.729
CNS0095599Silvery flower (diploied) 279.812
CNS0095600Silvery flower (diploied) 321.451
CNS0095601Golden flower (diploid) 1233.713
CNS0095602Golden flower (diploid) 221.608
CNS0095603Golden flower (diploid) 325.086
CNS0095604Slightly white alabastrum(tetraploid) 112.557
CNS0095605Slightly white alabastrum(tetraploid) 214.734
CNS0095606Slightly white alabastrum(tetraploid) 311.528
CNS0095607Whole white alabastrum(tetraploid) 16.411
CNS0095608Whole white alabastrum(tetraploid) 210.209
CNS0095609Whole white alabastrum(tetraploid) 36.784
CNS0095610Silvery flower (tetraploid) 15.042
CNS0095611Silvery flower (tetraploid) 22.258
CNS0095612Silvery flower (tetraploid) 33.874
CNS0095613Golden flower (tetraploid) 13.336
CNS0095614Golden flower (tetraploid) 24.270
CNS0095615Golden flower (tetraploid) 30.837
CRA001975CRR073297Stem 10.337
CRR073298Stem 21.080
CRR073299Stem 31.688
CRR073300Leaf 13.305
CRR073301Leaf 21.749
CRR073302Leaf 33.447
CRR073303Juvenile bud 11.951
CRR073304Juvenile bud 21.292
CRR073305Juvenile bud 31.797
CRR073306Third green 11.006
CRR073307Third green 20.364
CRR073308Third green 30.959
CRR073309Second white 10.152
CRR073310Second white 20.384
CRR073311Second white 30.358
CRR073312Silver flowering 10.906
CRR073313Silver flowering 20.000
CRR073314Silver flowering 30.092
CRR073315Gold flowering 14.030
CRR073316Gold flowering 20.262
CRR073317Gold flowering 30.595
CRR073318Tawny withering 15.345
CRR073319Tawny withering 23.445
CRR073320Tawny withering 36.471