Detail information of GWHGAAZE006185


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrXP_011069844.10PREDICTED: SNARE-interacting protein KEULE-like isoform X3 [Sesamum indicum]
Swissprottr|Q9C5X3|KEULE_ARATH0SNARE-interacting protein KEULE
trEMBLtr|A0A068UN48|A0A068UN48_COFCA0Coffea canephora DH200=94 genomic scaffold, scaffold_41 {ECO:0000313|EMBL:CDP09881.1}
TAIR10AT1G12360.10Sec1/munc18-like (SM) proteins superfamily

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000002gene2077694420784557-
GWHAAZE00000002mRNA2077694420784557-
GWHAAZE00000002exon2077694420777084-
GWHAAZE00000002exon2077716020777250-
GWHAAZE00000002exon2077794820778135-
GWHAAZE00000002exon2077826120778338-
GWHAAZE00000002exon2077844120778560-
GWHAAZE00000002exon2077934020779435-
GWHAAZE00000002exon2077951620779641-
GWHAAZE00000002exon2078073020780826-
GWHAAZE00000002exon2078139520781471-
GWHAAZE00000002exon2078154820781646-
GWHAAZE00000002exon2078173820781821-
GWHAAZE00000002exon2078360020783791-
GWHAAZE00000002exon2078388120784006-
GWHAAZE00000002exon2078451920784557-
GWHAAZE00000002CDS2078451920784557-
GWHAAZE00000002CDS2078388120784006-
GWHAAZE00000002CDS2078360020783791-
GWHAAZE00000002CDS2078173820781821-
GWHAAZE00000002CDS2078154820781646-
GWHAAZE00000002CDS2078139520781471-
GWHAAZE00000002CDS2078073020780826-
GWHAAZE00000002CDS2077951620779641-
GWHAAZE00000002CDS2077934020779435-
GWHAAZE00000002CDS2077844120778560-
GWHAAZE00000002CDS2077826120778338-
GWHAAZE00000002CDS2077794820778135-
GWHAAZE00000002CDS2077716020777250-
GWHAAZE00000002CDS2077694420777084-
Transcript Sequence

Network for GWHGAAZE006185

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00995.24Sec135001.30E-82
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K15292STXBP1, MUNC18-1 Synaptic vesicle cycle map04721

Gene Ontology

GO term OntologyName
GO:0006904biological_processvesicle docking involved in exocytosis
GO:0016192biological_processvesicle-mediated transport

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf10.807
SRR3591706second leaf4.351
SRR3591707mature leaf6.785
SRR3591708Shoot apex5.236
SRR3591709Stem15.442
SRR3591710White floral bud20.348
SRR3591711White flower23.923
SRR3591712Green floral bud14.570
SRR3591713Yellow flower25.441
SRP173429 SRR8316895Juvenile bud stage 8.461
SRR8316896Juvenile bud stage 13.649
SRR8316897Juvenile bud stage 7.555
SRR8316894Third green stage 5.727
SRR8316900Third green stage 15.144
SRR8316901Third green stage 16.996
SRR8316898Complete white stage 11.801
SRR8316899Complete white stage 20.884
SRR8316903Complete white stage 17.642
SRR8316902Silver flowering stage13.106
SRR8316904Silver flowering stage16.325
SRR8316905Silver flowering stage6.731
SRR8316906Gold flowering stage 20.988
SRR8316907Gold flowering stage 22.680
SRR8316908Gold flowering stage 20.588
SRP132670SRR6706286Control8.077
SRR6706287Light intensity 50%10.017
SRR6706288Light intensity 20%10.742
CNP0000432CNS0095592Slightly white alabastrum(diploid) 115.854
CNS0095593Slightly white alabastrum(diploid) 210.523
CNS0095594Slightly white alabastrum(diploid) 311.858
CNS0095595Whole white alabastrum(diploid) 211.741
CNS0095596Whole white alabastrum(diploid) 312.383
CNS0095597Whole white alabastrum(diploid) 413.409
CNS0095598Silvery flower (diploied) 110.045
CNS0095599Silvery flower (diploied) 211.810
CNS0095600Silvery flower (diploied) 317.994
CNS0095601Golden flower (diploid) 110.785
CNS0095602Golden flower (diploid) 214.146
CNS0095603Golden flower (diploid) 314.405
CNS0095604Slightly white alabastrum(tetraploid) 119.636
CNS0095605Slightly white alabastrum(tetraploid) 215.464
CNS0095606Slightly white alabastrum(tetraploid) 315.319
CNS0095607Whole white alabastrum(tetraploid) 116.642
CNS0095608Whole white alabastrum(tetraploid) 213.501
CNS0095609Whole white alabastrum(tetraploid) 318.223
CNS0095610Silvery flower (tetraploid) 126.231
CNS0095611Silvery flower (tetraploid) 220.642
CNS0095612Silvery flower (tetraploid) 335.212
CNS0095613Golden flower (tetraploid) 116.592
CNS0095614Golden flower (tetraploid) 222.955
CNS0095615Golden flower (tetraploid) 320.324
CRA001975CRR073297Stem 111.368
CRR073298Stem 211.042
CRR073299Stem 36.616
CRR073300Leaf 112.955
CRR073301Leaf 212.448
CRR073302Leaf 38.785
CRR073303Juvenile bud 18.259
CRR073304Juvenile bud 25.798
CRR073305Juvenile bud 38.508
CRR073306Third green 16.033
CRR073307Third green 25.908
CRR073308Third green 37.903
CRR073309Second white 17.120
CRR073310Second white 213.017
CRR073311Second white 312.140
CRR073312Silver flowering 17.734
CRR073313Silver flowering 24.141
CRR073314Silver flowering 37.684
CRR073315Gold flowering 11.807
CRR073316Gold flowering 23.345
CRR073317Gold flowering 30.819
CRR073318Tawny withering 17.254
CRR073319Tawny withering 27.506
CRR073320Tawny withering 36.515