Detail information of GWHGAAZE006155


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrCBI34777.31.39904E-98unnamed protein product [Vitis vinifera]
Swissprottr|P51092|LDOX_PETHY4E-96Leucoanthocyanidin dioxygenase
trEMBLtr|B9RBZ0|B9RBZ0_RICCO4E-98Leucoanthocyanidin dioxygenase, putative {ECO:0000313|EMBL:EEF51061.1}
TAIR10AT4G22880.22E-72leucoanthocyanidin dioxygenase

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000002gene2027268620273192+
GWHAAZE00000002mRNA2027268620273192+
GWHAAZE00000002exon2027268620273192+
GWHAAZE00000002CDS2027268620273192+
Transcript Sequence

Network for GWHGAAZE006155

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF14226.7DIOX_N491627.50E-24
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K05277ANS Metabolic pathways map01100
Biosynthesis of secondary metabolitesmap01110
Flavonoid biosynthesismap00941

Gene Ontology

GO term OntologyName

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf15.309
SRR3591706second leaf1.055
SRR3591707mature leaf0.000
SRR3591708Shoot apex4.387
SRR3591709Stem37.790
SRR3591710White floral bud19.029
SRR3591711White flower6.911
SRR3591712Green floral bud51.261
SRR3591713Yellow flower0.210
SRP173429 SRR8316895Juvenile bud stage 54.794
SRR8316896Juvenile bud stage 48.073
SRR8316897Juvenile bud stage 5.351
SRR8316894Third green stage 7.560
SRR8316900Third green stage 17.007
SRR8316901Third green stage 15.025
SRR8316898Complete white stage 1.213
SRR8316899Complete white stage 21.207
SRR8316903Complete white stage 8.162
SRR8316902Silver flowering stage0.686
SRR8316904Silver flowering stage1.904
SRR8316905Silver flowering stage0.128
SRR8316906Gold flowering stage 1.501
SRR8316907Gold flowering stage 2.978
SRR8316908Gold flowering stage 3.237
SRP132670SRR6706286Control35.270
SRR6706287Light intensity 50%37.747
SRR6706288Light intensity 20%35.939
CNP0000432CNS0095592Slightly white alabastrum(diploid) 1111.351
CNS0095593Slightly white alabastrum(diploid) 260.354
CNS0095594Slightly white alabastrum(diploid) 3223.366
CNS0095595Whole white alabastrum(diploid) 264.289
CNS0095596Whole white alabastrum(diploid) 369.400
CNS0095597Whole white alabastrum(diploid) 481.611
CNS0095598Silvery flower (diploied) 129.547
CNS0095599Silvery flower (diploied) 229.782
CNS0095600Silvery flower (diploied) 314.422
CNS0095601Golden flower (diploid) 123.810
CNS0095602Golden flower (diploid) 210.442
CNS0095603Golden flower (diploid) 310.968
CNS0095604Slightly white alabastrum(tetraploid) 158.480
CNS0095605Slightly white alabastrum(tetraploid) 268.148
CNS0095606Slightly white alabastrum(tetraploid) 341.493
CNS0095607Whole white alabastrum(tetraploid) 190.019
CNS0095608Whole white alabastrum(tetraploid) 267.598
CNS0095609Whole white alabastrum(tetraploid) 336.621
CNS0095610Silvery flower (tetraploid) 14.500
CNS0095611Silvery flower (tetraploid) 25.794
CNS0095612Silvery flower (tetraploid) 34.296
CNS0095613Golden flower (tetraploid) 11.063
CNS0095614Golden flower (tetraploid) 20.945
CNS0095615Golden flower (tetraploid) 30.697
CRA001975CRR073297Stem 133.968
CRR073298Stem 224.183
CRR073299Stem 323.966
CRR073300Leaf 110.817
CRR073301Leaf 27.170
CRR073302Leaf 35.931
CRR073303Juvenile bud 10.698
CRR073304Juvenile bud 26.964
CRR073305Juvenile bud 36.099
CRR073306Third green 12.923
CRR073307Third green 227.883
CRR073308Third green 34.279
CRR073309Second white 10.078
CRR073310Second white 20.252
CRR073311Second white 30.286
CRR073312Silver flowering 10.176
CRR073313Silver flowering 20.181
CRR073314Silver flowering 30.185
CRR073315Gold flowering 10.000
CRR073316Gold flowering 20.740
CRR073317Gold flowering 30.011
CRR073318Tawny withering 111.841
CRR073319Tawny withering 212.518
CRR073320Tawny withering 38.234