Detail information of GWHGAAZE006138


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrXP_011072042.13.8199E-142PREDICTED: phospholipase D beta 1-like [Sesamum indicum]
Swissprottr|Q9T053|PLDG1_ARATH8E-126Phospholipase D gamma 1
trEMBLtr|A0A067FBT7|A0A067FBT7_CITSI1E-139Uncharacterized protein {ECO:0000313|EMBL:KDO63615.1}
TAIR10AT4G11850.11E-106phospholipase D gamma 1

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000002gene1987248019873358-
GWHAAZE00000002mRNA1987248019873358-
GWHAAZE00000002exon1987248019873358-
GWHAAZE00000002CDS1987248019873358-
Transcript Sequence

Network for GWHGAAZE006138

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00168.31C2391631.00E-25
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K01115PLD1_2 Metabolic pathways map01100
Biosynthesis of secondary metabolitesmap01110
Glycerophospholipid metabolismmap00564
Ether lipid metabolismmap00565
Ras signaling pathwaymap04014
Phospholipase D signaling pathwaymap04072
Sphingolipid signaling pathwaymap04071
cAMP signaling pathwaymap04024
Endocytosismap04144
Fc gamma R-mediated phagocytosismap04666
GnRH signaling pathwaymap04912
Parathyroid hormone synthesis, secretion and actionmap04928
Glutamatergic synapsemap04724

Gene Ontology

GO term OntologyName

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf2.813
SRR3591706second leaf3.091
SRR3591707mature leaf2.370
SRR3591708Shoot apex2.406
SRR3591709Stem0.803
SRR3591710White floral bud1.241
SRR3591711White flower2.271
SRR3591712Green floral bud1.354
SRR3591713Yellow flower1.485
SRP173429 SRR8316895Juvenile bud stage 1.367
SRR8316896Juvenile bud stage 1.649
SRR8316897Juvenile bud stage 0.820
SRR8316894Third green stage 0.869
SRR8316900Third green stage 1.438
SRR8316901Third green stage 0.981
SRR8316898Complete white stage 0.716
SRR8316899Complete white stage 2.241
SRR8316903Complete white stage 1.758
SRR8316902Silver flowering stage0.319
SRR8316904Silver flowering stage0.811
SRR8316905Silver flowering stage0.159
SRR8316906Gold flowering stage 2.315
SRR8316907Gold flowering stage 1.300
SRR8316908Gold flowering stage 4.206
SRP132670SRR6706286Control1.218
SRR6706287Light intensity 50%1.535
SRR6706288Light intensity 20%1.519
CNP0000432CNS0095592Slightly white alabastrum(diploid) 10.607
CNS0095593Slightly white alabastrum(diploid) 20.336
CNS0095594Slightly white alabastrum(diploid) 31.146
CNS0095595Whole white alabastrum(diploid) 20.478
CNS0095596Whole white alabastrum(diploid) 30.063
CNS0095597Whole white alabastrum(diploid) 40.666
CNS0095598Silvery flower (diploied) 11.329
CNS0095599Silvery flower (diploied) 20.786
CNS0095600Silvery flower (diploied) 32.058
CNS0095601Golden flower (diploid) 10.581
CNS0095602Golden flower (diploid) 21.366
CNS0095603Golden flower (diploid) 32.200
CNS0095604Slightly white alabastrum(tetraploid) 10.968
CNS0095605Slightly white alabastrum(tetraploid) 20.307
CNS0095606Slightly white alabastrum(tetraploid) 32.176
CNS0095607Whole white alabastrum(tetraploid) 10.417
CNS0095608Whole white alabastrum(tetraploid) 20.254
CNS0095609Whole white alabastrum(tetraploid) 31.271
CNS0095610Silvery flower (tetraploid) 11.687
CNS0095611Silvery flower (tetraploid) 20.694
CNS0095612Silvery flower (tetraploid) 30.498
CNS0095613Golden flower (tetraploid) 10.893
CNS0095614Golden flower (tetraploid) 21.378
CNS0095615Golden flower (tetraploid) 30.678
CRA001975CRR073297Stem 11.166
CRR073298Stem 21.432
CRR073299Stem 30.810
CRR073300Leaf 11.250
CRR073301Leaf 21.291
CRR073302Leaf 31.173
CRR073303Juvenile bud 10.759
CRR073304Juvenile bud 21.166
CRR073305Juvenile bud 31.162
CRR073306Third green 10.318
CRR073307Third green 20.072
CRR073308Third green 30.518
CRR073309Second white 10.038
CRR073310Second white 20.095
CRR073311Second white 30.227
CRR073312Silver flowering 11.129
CRR073313Silver flowering 20.600
CRR073314Silver flowering 30.776
CRR073315Gold flowering 11.454
CRR073316Gold flowering 22.970
CRR073317Gold flowering 31.701
CRR073318Tawny withering 12.371
CRR073319Tawny withering 22.607
CRR073320Tawny withering 31.425