Detail information of GWHGAAZE006090


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrXP_011081147.11.1021E-107PREDICTED: probable serine/threonine-protein kinase At5g41260, partial [Sesamum indicum]
Swissprottr|Q9FHD7|Y5126_ARATH9E-84Probable serine/threonine-protein kinase At5g41260
trEMBLtr|A0A022Q6A9|A0A022Q6A9_ERYGU7E-106Uncharacterized protein {ECO:0000313|EMBL:EYU23481.1}
TAIR10AT1G63500.12E-73Protein kinase protein with tetratricopeptide repeat domain

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000002gene1916772719170936+
GWHAAZE00000002mRNA1916772719170936+
GWHAAZE00000002exon1916772719167729+
GWHAAZE00000002exon1916780519167957+
GWHAAZE00000002exon1916926719169380+
GWHAAZE00000002exon1917057519170936+
GWHAAZE00000002CDS1916772719167729+
GWHAAZE00000002CDS1916780519167957+
GWHAAZE00000002CDS1916926719169380+
GWHAAZE00000002CDS1917057519170820+
GWHAAZE00000002three_prime_UTR1917082119170936+
Transcript Sequence

Network for GWHGAAZE006090

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
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Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K14500BSK Plant hormone signal transduction map04075

Gene Ontology

GO term OntologyName
GO:0005515molecular_functionprotein binding

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf49.445
SRR3591706second leaf23.306
SRR3591707mature leaf19.814
SRR3591708Shoot apex29.179
SRR3591709Stem32.697
SRR3591710White floral bud24.412
SRR3591711White flower25.669
SRR3591712Green floral bud30.630
SRR3591713Yellow flower19.327
SRP173429 SRR8316895Juvenile bud stage 10.705
SRR8316896Juvenile bud stage 15.966
SRR8316897Juvenile bud stage 8.074
SRR8316894Third green stage 10.478
SRR8316900Third green stage 23.251
SRR8316901Third green stage 22.533
SRR8316898Complete white stage 8.880
SRR8316899Complete white stage 36.366
SRR8316903Complete white stage 13.450
SRR8316902Silver flowering stage11.496
SRR8316904Silver flowering stage18.074
SRR8316905Silver flowering stage7.897
SRR8316906Gold flowering stage 29.198
SRR8316907Gold flowering stage 22.586
SRR8316908Gold flowering stage 29.253
SRP132670SRR6706286Control24.138
SRR6706287Light intensity 50%27.070
SRR6706288Light intensity 20%27.611
CNP0000432CNS0095592Slightly white alabastrum(diploid) 112.324
CNS0095593Slightly white alabastrum(diploid) 217.448
CNS0095594Slightly white alabastrum(diploid) 312.532
CNS0095595Whole white alabastrum(diploid) 212.065
CNS0095596Whole white alabastrum(diploid) 313.096
CNS0095597Whole white alabastrum(diploid) 413.950
CNS0095598Silvery flower (diploied) 118.124
CNS0095599Silvery flower (diploied) 216.607
CNS0095600Silvery flower (diploied) 323.932
CNS0095601Golden flower (diploid) 115.992
CNS0095602Golden flower (diploid) 218.975
CNS0095603Golden flower (diploid) 318.173
CNS0095604Slightly white alabastrum(tetraploid) 113.563
CNS0095605Slightly white alabastrum(tetraploid) 212.140
CNS0095606Slightly white alabastrum(tetraploid) 322.811
CNS0095607Whole white alabastrum(tetraploid) 19.437
CNS0095608Whole white alabastrum(tetraploid) 28.757
CNS0095609Whole white alabastrum(tetraploid) 310.436
CNS0095610Silvery flower (tetraploid) 119.591
CNS0095611Silvery flower (tetraploid) 222.013
CNS0095612Silvery flower (tetraploid) 316.053
CNS0095613Golden flower (tetraploid) 115.620
CNS0095614Golden flower (tetraploid) 214.871
CNS0095615Golden flower (tetraploid) 314.436
CRA001975CRR073297Stem 127.404
CRR073298Stem 228.160
CRR073299Stem 320.317
CRR073300Leaf 132.960
CRR073301Leaf 232.446
CRR073302Leaf 327.228
CRR073303Juvenile bud 125.306
CRR073304Juvenile bud 219.457
CRR073305Juvenile bud 327.126
CRR073306Third green 19.556
CRR073307Third green 210.829
CRR073308Third green 310.805
CRR073309Second white 19.574
CRR073310Second white 29.613
CRR073311Second white 38.946
CRR073312Silver flowering 19.091
CRR073313Silver flowering 25.494
CRR073314Silver flowering 35.590
CRR073315Gold flowering 125.294
CRR073316Gold flowering 234.142
CRR073317Gold flowering 316.170
CRR073318Tawny withering 133.878
CRR073319Tawny withering 231.023
CRR073320Tawny withering 335.948