Detail information of GWHGAAZE006049


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrCBI34665.31.9806E-136unnamed protein product [Vitis vinifera]
Swissprottr|Q9CAD0|EGL1_ARATH3E-78Transcription factor EGL1
trEMBLtr|Q675M6|Q675M6_COROL2E-126Myc-like anthocyanin regulatory protein {ECO:0000313|EMBL:AAR21672.1}
TAIR10AT1G63650.34E-68basic helix-loop-helix (bHLH) DNA-binding superfamily protein

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000002gene1850437518511967-
GWHAAZE00000002mRNA1850437518511967-
GWHAAZE00000002exon1851195818511967-
GWHAAZE00000002exon1851089718510972-
GWHAAZE00000002exon1850689818506994-
GWHAAZE00000002exon1850631418506370-
GWHAAZE00000002exon1850593518506204-
GWHAAZE00000002exon1850538418505755-
GWHAAZE00000002exon1850475318505205-
GWHAAZE00000002exon1850437518504443-
GWHAAZE00000002CDS1851195818511967-
GWHAAZE00000002CDS1851089718510972-
GWHAAZE00000002CDS1850689818506994-
GWHAAZE00000002CDS1850631418506370-
GWHAAZE00000002CDS1850593518506204-
GWHAAZE00000002CDS1850538418505755-
GWHAAZE00000002CDS1850475318505205-
GWHAAZE00000002CDS1850437518504443-
Transcript Sequence

Network for GWHGAAZE006049

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF14215.7bHLH-MYC_N29951.80E-14
PF00010.27HLH2653115.40E-12
Protein Sequence

Gene family

Gene familysubfamily
Transcription Factors FamilybHLH

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0046983molecular_functionprotein dimerization activity

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf1.344
SRR3591706second leaf2.048
SRR3591707mature leaf3.685
SRR3591708Shoot apex2.780
SRR3591709Stem4.619
SRR3591710White floral bud1.761
SRR3591711White flower1.864
SRR3591712Green floral bud8.553
SRR3591713Yellow flower1.796
SRP173429 SRR8316895Juvenile bud stage 2.571
SRR8316896Juvenile bud stage 3.230
SRR8316897Juvenile bud stage 2.431
SRR8316894Third green stage 1.819
SRR8316900Third green stage 3.845
SRR8316901Third green stage 4.713
SRR8316898Complete white stage 1.613
SRR8316899Complete white stage 5.981
SRR8316903Complete white stage 2.255
SRR8316902Silver flowering stage1.115
SRR8316904Silver flowering stage1.547
SRR8316905Silver flowering stage0.449
SRR8316906Gold flowering stage 1.606
SRR8316907Gold flowering stage 1.077
SRR8316908Gold flowering stage 2.036
SRP132670SRR6706286Control2.450
SRR6706287Light intensity 50%2.701
SRR6706288Light intensity 20%3.082
CNP0000432CNS0095592Slightly white alabastrum(diploid) 14.188
CNS0095593Slightly white alabastrum(diploid) 25.068
CNS0095594Slightly white alabastrum(diploid) 33.397
CNS0095595Whole white alabastrum(diploid) 24.229
CNS0095596Whole white alabastrum(diploid) 34.512
CNS0095597Whole white alabastrum(diploid) 44.698
CNS0095598Silvery flower (diploied) 12.997
CNS0095599Silvery flower (diploied) 22.673
CNS0095600Silvery flower (diploied) 31.996
CNS0095601Golden flower (diploid) 12.149
CNS0095602Golden flower (diploid) 21.309
CNS0095603Golden flower (diploid) 31.190
CNS0095604Slightly white alabastrum(tetraploid) 16.471
CNS0095605Slightly white alabastrum(tetraploid) 25.132
CNS0095606Slightly white alabastrum(tetraploid) 38.220
CNS0095607Whole white alabastrum(tetraploid) 11.992
CNS0095608Whole white alabastrum(tetraploid) 22.270
CNS0095609Whole white alabastrum(tetraploid) 38.653
CNS0095610Silvery flower (tetraploid) 11.943
CNS0095611Silvery flower (tetraploid) 20.776
CNS0095612Silvery flower (tetraploid) 31.016
CNS0095613Golden flower (tetraploid) 11.589
CNS0095614Golden flower (tetraploid) 21.751
CNS0095615Golden flower (tetraploid) 30.135
CRA001975CRR073297Stem 12.572
CRR073298Stem 22.690
CRR073299Stem 32.015
CRR073300Leaf 13.573
CRR073301Leaf 23.017
CRR073302Leaf 32.786
CRR073303Juvenile bud 12.316
CRR073304Juvenile bud 22.406
CRR073305Juvenile bud 31.152
CRR073306Third green 10.409
CRR073307Third green 20.482
CRR073308Third green 30.411
CRR073309Second white 10.304
CRR073310Second white 20.187
CRR073311Second white 30.266
CRR073312Silver flowering 10.129
CRR073313Silver flowering 20.205
CRR073314Silver flowering 30.311
CRR073315Gold flowering 11.106
CRR073316Gold flowering 21.077
CRR073317Gold flowering 30.699
CRR073318Tawny withering 11.861
CRR073319Tawny withering 22.588
CRR073320Tawny withering 31.410