Detail information of GWHGAAZE005979


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrXP_006439413.10hypothetical protein CICLE_v10021324mg [Citrus clementina]
Swissprottr|Q40784|AAPC_CENCI2E-140Putative glucose-6-phosphate 1-epimerase
trEMBLtr|V4SXP3|V4SXP3_9ROSI0Uncharacterized protein {ECO:0000313|EMBL:ESR52653.1}
TAIR10AT4G23730.17E-137Galactose mutarotase-like superfamily protein

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000002gene1726721217270098-
GWHAAZE00000002mRNA1726721217270098-
GWHAAZE00000002exon1726998217270098-
GWHAAZE00000002exon1726974517269819-
GWHAAZE00000002exon1726954317269599-
GWHAAZE00000002exon1726926917269435-
GWHAAZE00000002exon1726797317268107-
GWHAAZE00000002exon1726771417267816-
GWHAAZE00000002exon1726746217267561-
GWHAAZE00000002exon1726721217267372-
GWHAAZE00000002CDS1726998217270098-
GWHAAZE00000002CDS1726974517269819-
GWHAAZE00000002CDS1726954317269599-
GWHAAZE00000002CDS1726926917269435-
GWHAAZE00000002CDS1726797317268107-
GWHAAZE00000002CDS1726771417267816-
GWHAAZE00000002CDS1726746217267561-
GWHAAZE00000002CDS1726721217267372-
Transcript Sequence

Network for GWHGAAZE005979

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF01263.21Aldose_epim273012.20E-70
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K01792E5.1.3.15 Metabolic pathways map01100
Biosynthesis of secondary metabolitesmap01110
Microbial metabolism in diverse environmentsmap01120
Glycolysis / Gluconeogenesismap00010

Gene Ontology

GO term OntologyName
GO:0005975biological_processcarbohydrate metabolic process
GO:0030246molecular_functioncarbohydrate binding
GO:0016853molecular_functionisomerase activity
GO:0003824molecular_functioncatalytic activity

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf7.217
SRR3591706second leaf66.408
SRR3591707mature leaf51.525
SRR3591708Shoot apex12.540
SRR3591709Stem9.994
SRR3591710White floral bud3.182
SRR3591711White flower5.582
SRR3591712Green floral bud5.147
SRR3591713Yellow flower0.984
SRP173429 SRR8316895Juvenile bud stage 0.978
SRR8316896Juvenile bud stage 1.722
SRR8316897Juvenile bud stage 0.905
SRR8316894Third green stage 0.518
SRR8316900Third green stage 1.647
SRR8316901Third green stage 1.380
SRR8316898Complete white stage 0.418
SRR8316899Complete white stage 2.850
SRR8316903Complete white stage 1.063
SRR8316902Silver flowering stage0.489
SRR8316904Silver flowering stage0.643
SRR8316905Silver flowering stage0.205
SRR8316906Gold flowering stage 1.138
SRR8316907Gold flowering stage 0.476
SRR8316908Gold flowering stage 0.613
SRP132670SRR6706286Control1.432
SRR6706287Light intensity 50%1.523
SRR6706288Light intensity 20%1.700
CNP0000432CNS0095592Slightly white alabastrum(diploid) 11.578
CNS0095593Slightly white alabastrum(diploid) 20.641
CNS0095594Slightly white alabastrum(diploid) 31.497
CNS0095595Whole white alabastrum(diploid) 20.585
CNS0095596Whole white alabastrum(diploid) 30.157
CNS0095597Whole white alabastrum(diploid) 41.050
CNS0095598Silvery flower (diploied) 11.250
CNS0095599Silvery flower (diploied) 20.494
CNS0095600Silvery flower (diploied) 30.628
CNS0095601Golden flower (diploid) 10.851
CNS0095602Golden flower (diploid) 20.394
CNS0095603Golden flower (diploid) 30.436
CNS0095604Slightly white alabastrum(tetraploid) 10.000
CNS0095605Slightly white alabastrum(tetraploid) 20.381
CNS0095606Slightly white alabastrum(tetraploid) 31.229
CNS0095607Whole white alabastrum(tetraploid) 10.024
CNS0095608Whole white alabastrum(tetraploid) 20.000
CNS0095609Whole white alabastrum(tetraploid) 30.621
CNS0095610Silvery flower (tetraploid) 10.464
CNS0095611Silvery flower (tetraploid) 20.516
CNS0095612Silvery flower (tetraploid) 30.289
CNS0095613Golden flower (tetraploid) 10.000
CNS0095614Golden flower (tetraploid) 20.174
CNS0095615Golden flower (tetraploid) 30.573
CRA001975CRR073297Stem 11.722
CRR073298Stem 22.143
CRR073299Stem 31.786
CRR073300Leaf 11.871
CRR073301Leaf 21.161
CRR073302Leaf 33.230
CRR073303Juvenile bud 10.145
CRR073304Juvenile bud 20.278
CRR073305Juvenile bud 30.348
CRR073306Third green 11.336
CRR073307Third green 20.874
CRR073308Third green 30.786
CRR073309Second white 10.497
CRR073310Second white 20.492
CRR073311Second white 30.675
CRR073312Silver flowering 10.003
CRR073313Silver flowering 20.898
CRR073314Silver flowering 30.117
CRR073315Gold flowering 114.396
CRR073316Gold flowering 223.490
CRR073317Gold flowering 312.705
CRR073318Tawny withering 17.910
CRR073319Tawny withering 29.346
CRR073320Tawny withering 39.971