Detail information of GWHGAAZE005913


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrCDP12195.10unnamed protein product [Coffea canephora]
Swissprottr|Q03685|BIP5_TOBAC0Luminal-binding protein 5 (Precursor)
trEMBLtr|A0A068UUL8|A0A068UUL8_COFCA0Coffea canephora DH200=94 genomic scaffold, scaffold_62 {ECO:0000313|EMBL:CDP12195.1}
TAIR10AT5G42020.10Heat shock protein 70 (Hsp 70) family protein

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000002gene1605703816060979-
GWHAAZE00000002mRNA1605703816060979-
GWHAAZE00000002exon1606092216060979-
GWHAAZE00000002exon1605959016059857-
GWHAAZE00000002exon1605926916059483-
GWHAAZE00000002exon1605892316059165-
GWHAAZE00000002exon1605837916058843-
GWHAAZE00000002exon1605808916058243-
GWHAAZE00000002exon1605790116057983-
GWHAAZE00000002exon1605703816057539-
GWHAAZE00000002CDS1606092216060979-
GWHAAZE00000002CDS1605959016059857-
GWHAAZE00000002CDS1605926916059483-
GWHAAZE00000002CDS1605892316059165-
GWHAAZE00000002CDS1605837916058843-
GWHAAZE00000002CDS1605808916058243-
GWHAAZE00000002CDS1605790116057983-
GWHAAZE00000002CDS1605703816057539-
Transcript Sequence

Network for GWHGAAZE005913

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation
CFinderModule0056map04141 Protein processing in endoplasmic reticulum
GO:0016853 isomerase activity GOslim:molecular_function
map04918 Thyroid hormone synthesis
map03060 Protein export
GO:0045454 cell redox homeostasis GOslim:biological_process
CFinderModule0189map03060 Protein export
map04141 Protein processing in endoplasmic reticulum
GO:0015031 protein transport GOslim:biological_process
GO:0004190 aspartic-type endopeptidase activity GOslim:molecular_function
map04918 Thyroid hormone synthesis
map04145 Phagosome


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00012.21HSP70386404.40E-262
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K09490HSPA5, BIP Protein export map03060
Protein processing in endoplasmic reticulummap04141
Thyroid hormone synthesismap04918

Gene Ontology

GO term OntologyName

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf376.094
SRR3591706second leaf240.783
SRR3591707mature leaf205.369
SRR3591708Shoot apex248.574
SRR3591709Stem144.051
SRR3591710White floral bud356.414
SRR3591711White flower311.852
SRR3591712Green floral bud460.677
SRR3591713Yellow flower826.307
SRP173429 SRR8316895Juvenile bud stage 243.517
SRR8316896Juvenile bud stage 277.137
SRR8316897Juvenile bud stage 159.447
SRR8316894Third green stage 158.408
SRR8316900Third green stage 545.477
SRR8316901Third green stage 478.199
SRR8316898Complete white stage 213.174
SRR8316899Complete white stage 367.684
SRR8316903Complete white stage 333.827
SRR8316902Silver flowering stage200.945
SRR8316904Silver flowering stage298.683
SRR8316905Silver flowering stage167.957
SRR8316906Gold flowering stage 534.837
SRR8316907Gold flowering stage 479.687
SRR8316908Gold flowering stage 411.279
SRP132670SRR6706286Control422.146
SRR6706287Light intensity 50%414.266
SRR6706288Light intensity 20%423.243
CNP0000432CNS0095592Slightly white alabastrum(diploid) 1338.388
CNS0095593Slightly white alabastrum(diploid) 2330.872
CNS0095594Slightly white alabastrum(diploid) 3354.871
CNS0095595Whole white alabastrum(diploid) 2325.038
CNS0095596Whole white alabastrum(diploid) 3380.598
CNS0095597Whole white alabastrum(diploid) 4264.008
CNS0095598Silvery flower (diploied) 1414.251
CNS0095599Silvery flower (diploied) 2258.118
CNS0095600Silvery flower (diploied) 3431.140
CNS0095601Golden flower (diploid) 1143.391
CNS0095602Golden flower (diploid) 2802.729
CNS0095603Golden flower (diploid) 3803.889
CNS0095604Slightly white alabastrum(tetraploid) 1350.323
CNS0095605Slightly white alabastrum(tetraploid) 2320.671
CNS0095606Slightly white alabastrum(tetraploid) 3528.714
CNS0095607Whole white alabastrum(tetraploid) 1304.419
CNS0095608Whole white alabastrum(tetraploid) 2259.618
CNS0095609Whole white alabastrum(tetraploid) 3583.091
CNS0095610Silvery flower (tetraploid) 1458.767
CNS0095611Silvery flower (tetraploid) 2284.099
CNS0095612Silvery flower (tetraploid) 3227.968
CNS0095613Golden flower (tetraploid) 1271.526
CNS0095614Golden flower (tetraploid) 2434.201
CNS0095615Golden flower (tetraploid) 3548.569
CRA001975CRR073297Stem 1281.117
CRR073298Stem 2279.003
CRR073299Stem 3311.416
CRR073300Leaf 1352.520
CRR073301Leaf 2349.540
CRR073302Leaf 3371.048
CRR073303Juvenile bud 1402.734
CRR073304Juvenile bud 2436.707
CRR073305Juvenile bud 3409.449
CRR073306Third green 1201.699
CRR073307Third green 2178.143
CRR073308Third green 3204.942
CRR073309Second white 1309.032
CRR073310Second white 2173.697
CRR073311Second white 3225.429
CRR073312Silver flowering 1920.427
CRR073313Silver flowering 21455.652
CRR073314Silver flowering 31172.277
CRR073315Gold flowering 164.155
CRR073316Gold flowering 281.355
CRR073317Gold flowering 3124.134
CRR073318Tawny withering 1204.609
CRR073319Tawny withering 2127.866
CRR073320Tawny withering 3224.500