Detail information of GWHGAAZE005895


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrXP_007039430.10No lysine kinase 10 isoform 1 [Theobroma cacao]
Swissprottr|Q944Q0|WNK8_ARATH0Serine/threonine-protein kinase WNK8
trEMBLtr|A0A061G2W9|A0A061G2W9_THECC0No lysine kinase 10 isoform 1 {ECO:0000313|EMBL:EOY23931.1}
TAIR10AT5G41990.13E-151with no lysine (K) kinase 8

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000002gene1582849315831547-
GWHAAZE00000002mRNA1582849315831547-
GWHAAZE00000002exon1582849315828938-
GWHAAZE00000002exon1582903815829392-
GWHAAZE00000002exon1582948215829639-
GWHAAZE00000002exon1582972715829947-
GWHAAZE00000002exon1583003815830265-
GWHAAZE00000002exon1583042615830463-
GWHAAZE00000002exon1583138315831547-
GWHAAZE00000002five_prime_UTR1583150915831547-
GWHAAZE00000002CDS1583138315831508-
GWHAAZE00000002CDS1583042615830463-
GWHAAZE00000002CDS1583003815830265-
GWHAAZE00000002CDS1582972715829947-
GWHAAZE00000002CDS1582948215829639-
GWHAAZE00000002CDS1582903815829392-
GWHAAZE00000002CDS1582849315828938-
Transcript Sequence

Network for GWHGAAZE005895

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00069.26Pkinase442981.30E-53
Protein Sequence

Gene family

Gene familysubfamily
Protein Kinases FamilyWNK_NRBP

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0006468biological_processprotein phosphorylation
GO:0004672molecular_functionprotein kinase activity
GO:0005524molecular_functionATP binding

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf16.022
SRR3591706second leaf6.116
SRR3591707mature leaf9.127
SRR3591708Shoot apex9.360
SRR3591709Stem27.691
SRR3591710White floral bud26.811
SRR3591711White flower34.826
SRR3591712Green floral bud11.612
SRR3591713Yellow flower30.176
SRP173429 SRR8316895Juvenile bud stage 5.830
SRR8316896Juvenile bud stage 8.931
SRR8316897Juvenile bud stage 4.914
SRR8316894Third green stage 4.228
SRR8316900Third green stage 9.797
SRR8316901Third green stage 10.841
SRR8316898Complete white stage 6.785
SRR8316899Complete white stage 15.523
SRR8316903Complete white stage 10.395
SRR8316902Silver flowering stage8.892
SRR8316904Silver flowering stage10.258
SRR8316905Silver flowering stage5.096
SRR8316906Gold flowering stage 17.698
SRR8316907Gold flowering stage 17.398
SRR8316908Gold flowering stage 21.803
SRP132670SRR6706286Control9.436
SRR6706287Light intensity 50%10.085
SRR6706288Light intensity 20%9.539
CNP0000432CNS0095592Slightly white alabastrum(diploid) 19.414
CNS0095593Slightly white alabastrum(diploid) 29.733
CNS0095594Slightly white alabastrum(diploid) 311.426
CNS0095595Whole white alabastrum(diploid) 27.796
CNS0095596Whole white alabastrum(diploid) 39.831
CNS0095597Whole white alabastrum(diploid) 48.023
CNS0095598Silvery flower (diploied) 114.008
CNS0095599Silvery flower (diploied) 210.500
CNS0095600Silvery flower (diploied) 319.678
CNS0095601Golden flower (diploid) 111.207
CNS0095602Golden flower (diploid) 217.052
CNS0095603Golden flower (diploid) 318.127
CNS0095604Slightly white alabastrum(tetraploid) 19.554
CNS0095605Slightly white alabastrum(tetraploid) 212.146
CNS0095606Slightly white alabastrum(tetraploid) 38.366
CNS0095607Whole white alabastrum(tetraploid) 18.313
CNS0095608Whole white alabastrum(tetraploid) 27.251
CNS0095609Whole white alabastrum(tetraploid) 38.581
CNS0095610Silvery flower (tetraploid) 119.697
CNS0095611Silvery flower (tetraploid) 214.702
CNS0095612Silvery flower (tetraploid) 323.050
CNS0095613Golden flower (tetraploid) 119.934
CNS0095614Golden flower (tetraploid) 216.727
CNS0095615Golden flower (tetraploid) 325.497
CRA001975CRR073297Stem 16.366
CRR073298Stem 25.770
CRR073299Stem 33.277
CRR073300Leaf 16.118
CRR073301Leaf 26.124
CRR073302Leaf 33.336
CRR073303Juvenile bud 16.037
CRR073304Juvenile bud 23.319
CRR073305Juvenile bud 36.332
CRR073306Third green 16.449
CRR073307Third green 27.308
CRR073308Third green 37.274
CRR073309Second white 13.206
CRR073310Second white 23.750
CRR073311Second white 35.274
CRR073312Silver flowering 17.691
CRR073313Silver flowering 24.201
CRR073314Silver flowering 35.706
CRR073315Gold flowering 17.757
CRR073316Gold flowering 29.299
CRR073317Gold flowering 32.766
CRR073318Tawny withering 116.501
CRR073319Tawny withering 215.687
CRR073320Tawny withering 312.145