Detail information of GWHGAAZE005888


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrXP_002280701.20PREDICTED: serine/threonine-protein kinase BLUS1-like isoform X1 [Vitis vinifera]
Swissprottr|O23304|BLUS1_ARATH1E-97Serine/threonine-protein kinase BLUS1
trEMBLtr|D7TVQ3|D7TVQ3_VITVI0Putative uncharacterized protein {ECO:0000313|EMBL:CBI34578.3}
TAIR10AT4G10730.10Protein kinase superfamily protein

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000002gene1573013815746750-
GWHAAZE00000002mRNA1573013815746750-
GWHAAZE00000002exon1574665915746750-
GWHAAZE00000002exon1574637315746564-
GWHAAZE00000002exon1573906115739315-
GWHAAZE00000002exon1573883415738958-
GWHAAZE00000002exon1573792415737968-
GWHAAZE00000002exon1573694515737026-
GWHAAZE00000002exon1573653915736607-
GWHAAZE00000002exon1573618115736351-
GWHAAZE00000002exon1573602815736093-
GWHAAZE00000002exon1573526215735330-
GWHAAZE00000002exon1573505415735125-
GWHAAZE00000002exon1573483315734894-
GWHAAZE00000002exon1573411215734381-
GWHAAZE00000002exon1573301715733153-
GWHAAZE00000002exon1573281315732907-
GWHAAZE00000002exon1573270615732744-
GWHAAZE00000002exon1573255615732618-
GWHAAZE00000002exon1573122615731327-
GWHAAZE00000002exon1573104115731092-
GWHAAZE00000002exon1573089315730948-
GWHAAZE00000002exon1573046515730532-
GWHAAZE00000002exon1573031915730370-
GWHAAZE00000002exon1573013815730209-
GWHAAZE00000002five_prime_UTR1574665915746750-
GWHAAZE00000002five_prime_UTR1574653815746564-
GWHAAZE00000002CDS1574637315746537-
GWHAAZE00000002CDS1573906115739315-
GWHAAZE00000002CDS1573883415738958-
GWHAAZE00000002CDS1573792415737968-
GWHAAZE00000002CDS1573694515737026-
GWHAAZE00000002CDS1573653915736607-
GWHAAZE00000002CDS1573618115736351-
GWHAAZE00000002CDS1573602815736093-
GWHAAZE00000002CDS1573526215735330-
GWHAAZE00000002CDS1573505415735125-
GWHAAZE00000002CDS1573483315734894-
GWHAAZE00000002CDS1573411215734381-
GWHAAZE00000002CDS1573301715733153-
GWHAAZE00000002CDS1573281315732907-
GWHAAZE00000002CDS1573270615732744-
GWHAAZE00000002CDS1573255615732618-
GWHAAZE00000002CDS1573122615731327-
GWHAAZE00000002CDS1573104115731092-
GWHAAZE00000002CDS1573089315730948-
GWHAAZE00000002CDS1573046515730532-
GWHAAZE00000002CDS1573031915730370-
GWHAAZE00000002CDS1573013815730209-
Transcript Sequence

Network for GWHGAAZE005888

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00069.26Pkinase152763.90E-59
Protein Sequence

Gene family

Gene familysubfamily
Protein Kinases FamilySTE_STE20-Fray

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0006468biological_processprotein phosphorylation
GO:0005524molecular_functionATP binding
GO:0004672molecular_functionprotein kinase activity

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf23.627
SRR3591706second leaf16.229
SRR3591707mature leaf25.175
SRR3591708Shoot apex18.792
SRR3591709Stem28.467
SRR3591710White floral bud37.557
SRR3591711White flower39.410
SRR3591712Green floral bud22.672
SRR3591713Yellow flower45.957
SRP173429 SRR8316895Juvenile bud stage 13.497
SRR8316896Juvenile bud stage 16.849
SRR8316897Juvenile bud stage 9.910
SRR8316894Third green stage 7.972
SRR8316900Third green stage 21.712
SRR8316901Third green stage 19.352
SRR8316898Complete white stage 12.102
SRR8316899Complete white stage 25.463
SRR8316903Complete white stage 31.537
SRR8316902Silver flowering stage17.319
SRR8316904Silver flowering stage25.668
SRR8316905Silver flowering stage11.759
SRR8316906Gold flowering stage 42.994
SRR8316907Gold flowering stage 35.210
SRR8316908Gold flowering stage 41.792
SRP132670SRR6706286Control22.455
SRR6706287Light intensity 50%24.087
SRR6706288Light intensity 20%23.627
CNP0000432CNS0095592Slightly white alabastrum(diploid) 111.628
CNS0095593Slightly white alabastrum(diploid) 27.810
CNS0095594Slightly white alabastrum(diploid) 310.396
CNS0095595Whole white alabastrum(diploid) 27.802
CNS0095596Whole white alabastrum(diploid) 37.896
CNS0095597Whole white alabastrum(diploid) 48.636
CNS0095598Silvery flower (diploied) 114.607
CNS0095599Silvery flower (diploied) 210.792
CNS0095600Silvery flower (diploied) 327.876
CNS0095601Golden flower (diploid) 113.738
CNS0095602Golden flower (diploid) 230.766
CNS0095603Golden flower (diploid) 330.310
CNS0095604Slightly white alabastrum(tetraploid) 110.765
CNS0095605Slightly white alabastrum(tetraploid) 27.902
CNS0095606Slightly white alabastrum(tetraploid) 326.268
CNS0095607Whole white alabastrum(tetraploid) 17.476
CNS0095608Whole white alabastrum(tetraploid) 26.297
CNS0095609Whole white alabastrum(tetraploid) 315.816
CNS0095610Silvery flower (tetraploid) 132.247
CNS0095611Silvery flower (tetraploid) 230.225
CNS0095612Silvery flower (tetraploid) 342.888
CNS0095613Golden flower (tetraploid) 123.283
CNS0095614Golden flower (tetraploid) 232.358
CNS0095615Golden flower (tetraploid) 347.568
CRA001975CRR073297Stem 125.990
CRR073298Stem 221.613
CRR073299Stem 320.388
CRR073300Leaf 126.470
CRR073301Leaf 221.525
CRR073302Leaf 317.789
CRR073303Juvenile bud 118.963
CRR073304Juvenile bud 218.038
CRR073305Juvenile bud 328.668
CRR073306Third green 124.188
CRR073307Third green 217.759
CRR073308Third green 325.231
CRR073309Second white 122.252
CRR073310Second white 229.583
CRR073311Second white 334.819
CRR073312Silver flowering 126.380
CRR073313Silver flowering 227.780
CRR073314Silver flowering 325.222
CRR073315Gold flowering 19.839
CRR073316Gold flowering 215.959
CRR073317Gold flowering 310.276
CRR073318Tawny withering 117.958
CRR073319Tawny withering 214.629
CRR073320Tawny withering 317.559