Detail information of GWHGAAZE005676


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrXP_002267645.16.84599E-65PREDICTED: zinc finger protein ZAT5 [Vitis vinifera]
Swissprottr|Q681X4|ZAT5_ARATH1E-49Zinc finger protein ZAT5
trEMBLtr|A5ARW4|A5ARW4_VITVI3E-65Putative uncharacterized protein {ECO:0000313|EMBL:CAN64839.1}
TAIR10AT2G28200.13E-41C2H2-type zinc finger family protein

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000002gene1180051411801074-
GWHAAZE00000002mRNA1180051411801074-
GWHAAZE00000002exon1180090711801074-
GWHAAZE00000002exon1180051411800819-
GWHAAZE00000002CDS1180090711801074-
GWHAAZE00000002CDS1180051411800819-
Transcript Sequence

Network for GWHGAAZE005676

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF13912.7zf-C2H2_622468.70E-12
PF13912.7zf-C2H2_670946.50E-13
Protein Sequence

Gene family

Gene familysubfamily
Transcription Factors FamilyC2H2

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0003676molecular_functionnucleic acid binding

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf6.789
SRR3591706second leaf4.904
SRR3591707mature leaf0.319
SRR3591708Shoot apex2.665
SRR3591709Stem11.989
SRR3591710White floral bud3.032
SRR3591711White flower1.061
SRR3591712Green floral bud5.249
SRR3591713Yellow flower0.571
SRP173429 SRR8316895Juvenile bud stage 0.805
SRR8316896Juvenile bud stage 0.870
SRR8316897Juvenile bud stage 0.792
SRR8316894Third green stage 0.710
SRR8316900Third green stage 3.358
SRR8316901Third green stage 5.382
SRR8316898Complete white stage 0.308
SRR8316899Complete white stage 3.018
SRR8316903Complete white stage 2.311
SRR8316902Silver flowering stage0.144
SRR8316904Silver flowering stage0.268
SRR8316905Silver flowering stage0.000
SRR8316906Gold flowering stage 0.154
SRR8316907Gold flowering stage 0.095
SRR8316908Gold flowering stage 0.319
SRP132670SRR6706286Control3.306
SRR6706287Light intensity 50%3.746
SRR6706288Light intensity 20%5.131
CNP0000432CNS0095592Slightly white alabastrum(diploid) 13.056
CNS0095593Slightly white alabastrum(diploid) 23.336
CNS0095594Slightly white alabastrum(diploid) 31.428
CNS0095595Whole white alabastrum(diploid) 21.688
CNS0095596Whole white alabastrum(diploid) 31.404
CNS0095597Whole white alabastrum(diploid) 41.037
CNS0095598Silvery flower (diploied) 10.000
CNS0095599Silvery flower (diploied) 20.122
CNS0095600Silvery flower (diploied) 30.255
CNS0095601Golden flower (diploid) 10.422
CNS0095602Golden flower (diploid) 20.106
CNS0095603Golden flower (diploid) 30.000
CNS0095604Slightly white alabastrum(tetraploid) 11.647
CNS0095605Slightly white alabastrum(tetraploid) 23.368
CNS0095606Slightly white alabastrum(tetraploid) 34.400
CNS0095607Whole white alabastrum(tetraploid) 10.808
CNS0095608Whole white alabastrum(tetraploid) 20.568
CNS0095609Whole white alabastrum(tetraploid) 32.184
CNS0095610Silvery flower (tetraploid) 10.491
CNS0095611Silvery flower (tetraploid) 20.164
CNS0095612Silvery flower (tetraploid) 30.094
CNS0095613Golden flower (tetraploid) 10.000
CNS0095614Golden flower (tetraploid) 20.000
CNS0095615Golden flower (tetraploid) 30.307
CRA001975CRR073297Stem 10.036
CRR073298Stem 21.120
CRR073299Stem 30.970
CRR073300Leaf 12.047
CRR073301Leaf 21.131
CRR073302Leaf 32.634
CRR073303Juvenile bud 12.166
CRR073304Juvenile bud 21.086
CRR073305Juvenile bud 34.578
CRR073306Third green 11.144
CRR073307Third green 23.554
CRR073308Third green 31.831
CRR073309Second white 10.000
CRR073310Second white 20.000
CRR073311Second white 30.126
CRR073312Silver flowering 10.000
CRR073313Silver flowering 20.000
CRR073314Silver flowering 30.000
CRR073315Gold flowering 10.122
CRR073316Gold flowering 21.296
CRR073317Gold flowering 30.089
CRR073318Tawny withering 14.238
CRR073319Tawny withering 20.888
CRR073320Tawny withering 33.415