Detail information of GWHGAAZE005594


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrKDO83027.11.83949E-60hypothetical protein CISIN_1g046443mg [Citrus sinensis]
Swissprottr|Q42510|GNOM_ARATH2E-49ARF guanine-nucleotide exchange factor GNOM
trEMBLtr|A0A067H5P0|A0A067H5P0_CITSI7E-61Uncharacterized protein {ECO:0000313|EMBL:KDO83027.1}
TAIR10AT1G13980.22E-36sec7 domain-containing protein

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000002gene1045594910456353-
GWHAAZE00000002mRNA1045594910456353-
GWHAAZE00000002exon1045594910456353-
GWHAAZE00000002CDS1045594910456353-
Transcript Sequence

Network for GWHGAAZE005594

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
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Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K18443GBF1 Endocytosis map04144

Gene Ontology

GO term OntologyName

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf22.446
SRR3591706second leaf12.350
SRR3591707mature leaf14.226
SRR3591708Shoot apex24.679
SRR3591709Stem25.332
SRR3591710White floral bud14.223
SRR3591711White flower12.013
SRR3591712Green floral bud27.631
SRR3591713Yellow flower9.408
SRP173429 SRR8316895Juvenile bud stage 13.663
SRR8316896Juvenile bud stage 14.871
SRR8316897Juvenile bud stage 9.274
SRR8316894Third green stage 8.957
SRR8316900Third green stage 19.378
SRR8316901Third green stage 18.683
SRR8316898Complete white stage 4.805
SRR8316899Complete white stage 17.663
SRR8316903Complete white stage 12.389
SRR8316902Silver flowering stage3.207
SRR8316904Silver flowering stage4.341
SRR8316905Silver flowering stage2.486
SRR8316906Gold flowering stage 8.970
SRR8316907Gold flowering stage 9.242
SRR8316908Gold flowering stage 10.465
SRP132670SRR6706286Control14.822
SRR6706287Light intensity 50%15.102
SRR6706288Light intensity 20%17.850
CNP0000432CNS0095592Slightly white alabastrum(diploid) 122.698
CNS0095593Slightly white alabastrum(diploid) 221.989
CNS0095594Slightly white alabastrum(diploid) 319.352
CNS0095595Whole white alabastrum(diploid) 217.314
CNS0095596Whole white alabastrum(diploid) 317.478
CNS0095597Whole white alabastrum(diploid) 420.678
CNS0095598Silvery flower (diploied) 113.014
CNS0095599Silvery flower (diploied) 27.326
CNS0095600Silvery flower (diploied) 311.706
CNS0095601Golden flower (diploid) 112.809
CNS0095602Golden flower (diploid) 218.387
CNS0095603Golden flower (diploid) 315.225
CNS0095604Slightly white alabastrum(tetraploid) 129.153
CNS0095605Slightly white alabastrum(tetraploid) 224.919
CNS0095606Slightly white alabastrum(tetraploid) 329.806
CNS0095607Whole white alabastrum(tetraploid) 116.666
CNS0095608Whole white alabastrum(tetraploid) 217.360
CNS0095609Whole white alabastrum(tetraploid) 317.204
CNS0095610Silvery flower (tetraploid) 113.073
CNS0095611Silvery flower (tetraploid) 213.287
CNS0095612Silvery flower (tetraploid) 310.383
CNS0095613Golden flower (tetraploid) 17.775
CNS0095614Golden flower (tetraploid) 212.601
CNS0095615Golden flower (tetraploid) 39.416
CRA001975CRR073297Stem 136.425
CRR073298Stem 236.150
CRR073299Stem 334.489
CRR073300Leaf 132.526
CRR073301Leaf 239.935
CRR073302Leaf 325.929
CRR073303Juvenile bud 144.289
CRR073304Juvenile bud 220.342
CRR073305Juvenile bud 349.078
CRR073306Third green 16.047
CRR073307Third green 23.465
CRR073308Third green 37.453
CRR073309Second white 16.927
CRR073310Second white 25.104
CRR073311Second white 39.113
CRR073312Silver flowering 18.650
CRR073313Silver flowering 25.823
CRR073314Silver flowering 36.285
CRR073315Gold flowering 114.437
CRR073316Gold flowering 220.331
CRR073317Gold flowering 318.465
CRR073318Tawny withering 136.240
CRR073319Tawny withering 235.059
CRR073320Tawny withering 343.389