Detail information of GWHGAAZE005563


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrXP_009762510.16.3636E-142PREDICTED: soluble inorganic pyrophosphatase-like isoform X1 [Nicotiana sylvestris]
Swissprottr|Q43187|IPYR_SOLTU6E-126Soluble inorganic pyrophosphatase
trEMBLtr|D7TQG4|D7TQG4_VITVI5E-142Putative uncharacterized protein {ECO:0000313|EMBL:CBI32684.3}
TAIR10AT3G53620.19E-105pyrophosphorylase 4

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000002gene1000369210005590-
GWHAAZE00000002mRNA1000369210005590-
GWHAAZE00000002exon1000369210003734-
GWHAAZE00000002exon1000386810003949-
GWHAAZE00000002exon1000408510004205-
GWHAAZE00000002exon1000428510004350-
GWHAAZE00000002exon1000452610004633-
GWHAAZE00000002exon1000471110004776-
GWHAAZE00000002exon1000532110005349-
GWHAAZE00000002exon1000545510005590-
GWHAAZE00000002CDS1000545510005590-
GWHAAZE00000002CDS1000532110005349-
GWHAAZE00000002CDS1000471110004776-
GWHAAZE00000002CDS1000452610004633-
GWHAAZE00000002CDS1000428510004350-
GWHAAZE00000002CDS1000408510004205-
GWHAAZE00000002CDS1000386810003949-
GWHAAZE00000002CDS1000369210003734-
Transcript Sequence

Network for GWHGAAZE005563

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00719.20Pyrophosphatase552067.00E-55
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K01507ppa Oxidative phosphorylation map00190

Gene Ontology

GO term OntologyName
GO:0006796biological_processphosphate-containing compound metabolic process
GO:0005737cellular_componentcytoplasm
GO:0000287molecular_functionmagnesium ion binding
GO:0004427molecular_functioninorganic diphosphatase activity

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf208.449
SRR3591706second leaf125.911
SRR3591707mature leaf90.597
SRR3591708Shoot apex89.285
SRR3591709Stem287.723
SRR3591710White floral bud146.086
SRR3591711White flower131.288
SRR3591712Green floral bud140.671
SRR3591713Yellow flower75.379
SRP173429 SRR8316895Juvenile bud stage 93.495
SRR8316896Juvenile bud stage 121.584
SRR8316897Juvenile bud stage 79.505
SRR8316894Third green stage 53.960
SRR8316900Third green stage 109.454
SRR8316901Third green stage 123.890
SRR8316898Complete white stage 72.236
SRR8316899Complete white stage 196.929
SRR8316903Complete white stage 95.340
SRR8316902Silver flowering stage68.461
SRR8316904Silver flowering stage91.967
SRR8316905Silver flowering stage50.251
SRR8316906Gold flowering stage 135.273
SRR8316907Gold flowering stage 114.489
SRR8316908Gold flowering stage 131.326
SRP132670SRR6706286Control67.256
SRR6706287Light intensity 50%80.470
SRR6706288Light intensity 20%88.083
CNP0000432CNS0095592Slightly white alabastrum(diploid) 1108.737
CNS0095593Slightly white alabastrum(diploid) 2127.714
CNS0095594Slightly white alabastrum(diploid) 3107.180
CNS0095595Whole white alabastrum(diploid) 284.136
CNS0095596Whole white alabastrum(diploid) 372.162
CNS0095597Whole white alabastrum(diploid) 477.362
CNS0095598Silvery flower (diploied) 153.874
CNS0095599Silvery flower (diploied) 266.892
CNS0095600Silvery flower (diploied) 373.803
CNS0095601Golden flower (diploid) 157.263
CNS0095602Golden flower (diploid) 256.151
CNS0095603Golden flower (diploid) 360.915
CNS0095604Slightly white alabastrum(tetraploid) 178.273
CNS0095605Slightly white alabastrum(tetraploid) 279.356
CNS0095606Slightly white alabastrum(tetraploid) 3120.239
CNS0095607Whole white alabastrum(tetraploid) 162.155
CNS0095608Whole white alabastrum(tetraploid) 271.835
CNS0095609Whole white alabastrum(tetraploid) 378.533
CNS0095610Silvery flower (tetraploid) 185.894
CNS0095611Silvery flower (tetraploid) 266.852
CNS0095612Silvery flower (tetraploid) 386.960
CNS0095613Golden flower (tetraploid) 159.954
CNS0095614Golden flower (tetraploid) 264.613
CNS0095615Golden flower (tetraploid) 338.210
CRA001975CRR073297Stem 1147.532
CRR073298Stem 2128.544
CRR073299Stem 3133.218
CRR073300Leaf 1141.335
CRR073301Leaf 2146.670
CRR073302Leaf 3149.307
CRR073303Juvenile bud 1138.937
CRR073304Juvenile bud 2135.848
CRR073305Juvenile bud 3155.384
CRR073306Third green 1175.912
CRR073307Third green 2197.865
CRR073308Third green 3153.429
CRR073309Second white 186.188
CRR073310Second white 270.353
CRR073311Second white 352.438
CRR073312Silver flowering 149.915
CRR073313Silver flowering 256.051
CRR073314Silver flowering 344.506
CRR073315Gold flowering 1169.138
CRR073316Gold flowering 2182.361
CRR073317Gold flowering 3161.858
CRR073318Tawny withering 1183.180
CRR073319Tawny withering 2202.513
CRR073320Tawny withering 3215.115