Gene detail

Detail information of GWHGAAZE005539

Functional Annotation

Database	Orthologs	E value	Annotation
Nr	CAN76214.1	0	hypothetical protein VITISV_009512 [Vitis vinifera]
Swissprot	tr\|Q93YN9\|IPPK_ARATH	1E-155	Inositol-pentakisphosphate 2-kinase
trEMBL	tr\|A5AZ37\|A5AZ37_VITVI	0	Putative uncharacterized protein {ECO:0000313\|EMBL:CAN76214.1}
TAIR10	AT5G42810.1	2E-129	inositol-pentakisphosphate 2-kinase 1

Location And Transcript Sequence (JBrowse)

Scaffold	Type	Start	End	Strand
GWHAAZE00000002	gene	9669554	9674879	+
GWHAAZE00000002	mRNA	9669554	9674879	+
GWHAAZE00000002	exon	9669554	9669663	+
GWHAAZE00000002	exon	9669757	9669799	+
GWHAAZE00000002	exon	9669876	9669980	+
GWHAAZE00000002	exon	9671260	9671493	+
GWHAAZE00000002	exon	9671694	9671913	+
GWHAAZE00000002	exon	9672155	9672251	+
GWHAAZE00000002	exon	9672320	9672539	+
GWHAAZE00000002	exon	9673115	9673717	+
GWHAAZE00000002	exon	9674470	9674667	+
GWHAAZE00000002	exon	9674793	9674879	+
GWHAAZE00000002	CDS	9669554	9669663	+
GWHAAZE00000002	CDS	9669757	9669799	+
GWHAAZE00000002	CDS	9669876	9669980	+
GWHAAZE00000002	CDS	9671260	9671493	+
GWHAAZE00000002	CDS	9671694	9671913	+
GWHAAZE00000002	CDS	9672155	9672251	+
GWHAAZE00000002	CDS	9672320	9672539	+
GWHAAZE00000002	CDS	9673115	9673717	+
GWHAAZE00000002	CDS	9674470	9674667	+
GWHAAZE00000002	CDS	9674793	9674879	+

Transcript Sequence
>GWHTAAZE005547 CAGAGTGTAGTGTCTGGTCGTTCTCCACTTTACAGTGGTATACCAGTCGTTTTCTATTTAAGTGGCAGCGGCTCATCAGAAGAATCAGTGCTAGAAGCCATCTTTGGTTTTTTCATATCCAATCCCCGCCACTCTTGCCATTTCAAGATAAAGGTGATGGAGTTGGTTTTAAATGCAAATCATGCTGGTGATTGGGTTTACAGAGGAGAAGGAGCTTGCAATCTTGTTCTTGCTTACACCGGATCCTCTCCTTATTTTATTGGCAAAGTATTGCGCATTCAAAAGGTTGCAAGAAATGGATCTAAATTGGACGATGGTCCTTCAACTCGATCTAAATTTGAGGGCGGTCCTTCCATTTTAACCACGCATGAACGTCTCTTGTGGGAAGAAATCAAAGATCTTGTTTTGGCCCCTACTAGGGAATTAGCAGAACAAGAGTATGTGCAGCATGTCATGAGCCCATTGTTAGGTTCTGAACATGTAGATGTTGGGATTCGCGTTCTTGTGGCCAGGGAATTTCTGGAGTCGGTTGAAAATAACGTTCTTTGTCAGAGGCCTTCTTGGCGAGTGGATGATGCAAAGGTCAACACTGAATGTGATTCTGCACTTCTCATATCTGACCATTCAGTTTTTCCCCGTGGTAATTACTTTCACCAGAAAATGCTTTATGTAAAATATGATTCAGTTTTTCCTTTCTTTCTTGGAATGCTCACGTGGCATCATAATATACCATTTACTCATCTCTCAGGTGTTGTTAAGGAGGACTTCTGCATATCCGTTGAGATAAAGGCACTACCCCTTCTACTGATAGTTGTCTATTCTGTTATTTTTTTGCCCTCCATTTCCATCCTTGTTTCTTCAAAGCAGCCCAAATGCGGATTCCTTCCACTTTCAAGTTTCATAGCAGAAGAAAATAACATTAAAAGGAGTGTAACTCGTTTTAAAATGCACCAGGCCTTGAAATTGCAGCAAGGAAAGGTAATTGTTCTTCATTCTTTTATTCTCTTCTTTATGCCAATTTATTCCCAGATATCACAAATAAGCGAATATGATCCACTGGATTTGTTCTCGGGGTCCAGTGACAGAGTACATAAAGCAATCAAGGCCCTTTATGTTACCCCCCAAAACAACTTTCGCGTATTCTTGAACGGGACCCTCATTTTTGGGGACATGGACGGTGGCGCAGATTGTAATAGTAGTTGTCTAACTAGACAAGCATTTGAAGATGCACTAAAGGGCGTTATTGCGGCAAATGATGGAATGCGTGCTGCTAATTTTCTACAGCTTGTTGCTGGTGCAGCTTTTAGATCAGGATTATTAGAACGATTACTTGAAGCCCAAAAGCTTGATAATTTTGATATAGAAGGGGCAATTCATGCATATTACGATGTTGTTTCTCAGCCTTGTGTGGTATGTGGAGAATTAGGTGAAGGAAAACGGTTGGGGAAATATAGTTCTTTGCATTCGATTCCAACAGATGAAAGTTTGAAGATTGTTAGAGACTATTTGATTTCTGCAACTGCCAAGGACTTGAGTATCATATTTGGTTTTAGGCCCAGGCAAAACGGGGATCTGAATTCACCGTATGATGCTGTTCTGCTAGAATCAGCCAACCAAACTTTTGATTACAAGGCATCTTTTATTGACCTGGATATGAAACCATTGAAGAAGATGGAATTCTATTACGAGTTAGATCAGGAGATAGTCAACTGTTACAATCACAAGGTCAAAATTGAGCATCAATCGAGCAAAGCTGCTGCAAGCATTGAGGAAACTTCATATCGAGATCAGACCAGATCCTTGGAAGATATCATACTAGAGATTCTACTGAGCAAAGACAAGGATCATCGACCACTCGAAATTAAGCTCATCTCGGAGCATGGAAAAAAGGATCGATGGATTTGCTCTCCCTCTTAA

Network for GWHGAAZE005539

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF06090.13	Ins_P5_2-kin	67	567	5.00E-85

Protein Sequence

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	pathway	mapID
K10572	IPPK	Metabolic pathways	map01100
		Inositol phosphate metabolism	map00562
		Phosphatidylinositol signaling system	map04070

Gene Ontology

GO term	Ontology	Name
GO:0005524	molecular_function	ATP binding
GO:0035299	molecular_function	inositol pentakisphosphate 2-kinase activity

Expression pattern

Expression pattern detail

SRP	Sample	Description	TPM
SRP075780	SRR3591705	youngest leaf	10.245
	SRR3591706	second leaf	7.098
	SRR3591707	mature leaf	9.216
	SRR3591708	Shoot apex	10.023
	SRR3591709	Stem	12.996
	SRR3591710	White floral bud	6.816
	SRR3591711	White flower	8.863
	SRR3591712	Green floral bud	8.550
	SRR3591713	Yellow flower	6.373
SRP173429	SRR8316895	Juvenile bud stage	7.244
	SRR8316896	Juvenile bud stage	9.991
	SRR8316897	Juvenile bud stage	6.891
	SRR8316894	Third green stage	3.176
	SRR8316900	Third green stage	7.664
	SRR8316901	Third green stage	5.616
	SRR8316898	Complete white stage	2.543
	SRR8316899	Complete white stage	12.458
	SRR8316903	Complete white stage	3.617
	SRR8316902	Silver flowering stage	1.655
	SRR8316904	Silver flowering stage	2.698
	SRR8316905	Silver flowering stage	0.832
	SRR8316906	Gold flowering stage	2.863
	SRR8316907	Gold flowering stage	2.895
	SRR8316908	Gold flowering stage	3.474
SRP132670	SRR6706286	Control	6.374
	SRR6706287	Light intensity 50%	6.164
	SRR6706288	Light intensity 20%	5.889
CNP0000432	CNS0095592	Slightly white alabastrum(diploid) 1	7.643
	CNS0095593	Slightly white alabastrum(diploid) 2	5.638
	CNS0095594	Slightly white alabastrum(diploid) 3	5.990
	CNS0095595	Whole white alabastrum(diploid) 2	4.722
	CNS0095596	Whole white alabastrum(diploid) 3	2.557
	CNS0095597	Whole white alabastrum(diploid) 4	3.193
	CNS0095598	Silvery flower (diploied) 1	9.513
	CNS0095599	Silvery flower (diploied) 2	7.819
	CNS0095600	Silvery flower (diploied) 3	4.654
	CNS0095601	Golden flower (diploid) 1	6.119
	CNS0095602	Golden flower (diploid) 2	6.119
	CNS0095603	Golden flower (diploid) 3	4.974
	CNS0095604	Slightly white alabastrum(tetraploid) 1	6.837
	CNS0095605	Slightly white alabastrum(tetraploid) 2	5.415
	CNS0095606	Slightly white alabastrum(tetraploid) 3	10.435
	CNS0095607	Whole white alabastrum(tetraploid) 1	3.088
	CNS0095608	Whole white alabastrum(tetraploid) 2	3.809
	CNS0095609	Whole white alabastrum(tetraploid) 3	6.457
	CNS0095610	Silvery flower (tetraploid) 1	5.452
	CNS0095611	Silvery flower (tetraploid) 2	5.140
	CNS0095612	Silvery flower (tetraploid) 3	3.653
	CNS0095613	Golden flower (tetraploid) 1	3.138
	CNS0095614	Golden flower (tetraploid) 2	5.337
	CNS0095615	Golden flower (tetraploid) 3	2.017
CRA001975	CRR073297	Stem 1	6.311
	CRR073298	Stem 2	5.242
	CRR073299	Stem 3	2.263
	CRR073300	Leaf 1	4.370
	CRR073301	Leaf 2	4.883
	CRR073302	Leaf 3	2.427
	CRR073303	Juvenile bud 1	1.994
	CRR073304	Juvenile bud 2	1.079
	CRR073305	Juvenile bud 3	2.254
	CRR073306	Third green 1	0.098
	CRR073307	Third green 2	0.173
	CRR073308	Third green 3	0.208
	CRR073309	Second white 1	0.306
	CRR073310	Second white 2	0.542
	CRR073311	Second white 3	0.318
	CRR073312	Silver flowering 1	0.129
	CRR073313	Silver flowering 2	0.035
	CRR073314	Silver flowering 3	0.000
	CRR073315	Gold flowering 1	2.672
	CRR073316	Gold flowering 2	4.980
	CRR073317	Gold flowering 3	1.125
	CRR073318	Tawny withering 1	5.079
	CRR073319	Tawny withering 2	6.919
	CRR073320	Tawny withering 3	5.089