Detail information of GWHGAAZE005479


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrXP_010279540.13.12629E-78PREDICTED: probable glutathione S-transferase isoform X1 [Nelumbo nucifera]
Swissprottr|P32110|GSTX6_SOYBN1E-67Probable glutathione S-transferase
trEMBLtr|D2WL57|D2WL57_POPTR1E-80Tau class glutathione transferase GSTU45 {ECO:0000313|EMBL:ADB11327.1}
TAIR10AT3G09270.17E-43glutathione S-transferase TAU 8

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000002gene85787178579707-
GWHAAZE00000002mRNA85787178579707-
GWHAAZE00000002exon85787178579088-
GWHAAZE00000002exon85794898579707-
GWHAAZE00000002CDS85794898579707-
GWHAAZE00000002CDS85787178579088-
Transcript Sequence

Network for GWHGAAZE005479

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF02798.21GST_N4738.10E-19
PF00043.26GST_C851603.70E-12
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K00799GST, gst Metabolic pathways map01100
Glutathione metabolismmap00480
Metabolism of xenobiotics by cytochrome P450map00980
Drug metabolism - cytochrome P450map00982
Drug metabolism - other enzymesmap00983
Longevity regulating pathway - wormmap04212

Gene Ontology

GO term OntologyName
GO:0005515molecular_functionprotein binding

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf53.620
SRR3591706second leaf12.978
SRR3591707mature leaf5.238
SRR3591708Shoot apex17.664
SRR3591709Stem151.115
SRR3591710White floral bud27.505
SRR3591711White flower16.866
SRR3591712Green floral bud35.285
SRR3591713Yellow flower15.072
SRP173429 SRR8316895Juvenile bud stage 11.567
SRR8316896Juvenile bud stage 21.318
SRR8316897Juvenile bud stage 8.586
SRR8316894Third green stage 7.911
SRR8316900Third green stage 23.886
SRR8316901Third green stage 21.405
SRR8316898Complete white stage 10.779
SRR8316899Complete white stage 58.450
SRR8316903Complete white stage 9.081
SRR8316902Silver flowering stage4.083
SRR8316904Silver flowering stage4.743
SRR8316905Silver flowering stage1.866
SRR8316906Gold flowering stage 6.705
SRR8316907Gold flowering stage 4.131
SRR8316908Gold flowering stage 5.710
SRP132670SRR6706286Control24.229
SRR6706287Light intensity 50%17.991
SRR6706288Light intensity 20%17.686
CNP0000432CNS0095592Slightly white alabastrum(diploid) 120.915
CNS0095593Slightly white alabastrum(diploid) 237.689
CNS0095594Slightly white alabastrum(diploid) 335.222
CNS0095595Whole white alabastrum(diploid) 217.024
CNS0095596Whole white alabastrum(diploid) 310.008
CNS0095597Whole white alabastrum(diploid) 415.624
CNS0095598Silvery flower (diploied) 113.310
CNS0095599Silvery flower (diploied) 212.494
CNS0095600Silvery flower (diploied) 310.725
CNS0095601Golden flower (diploid) 111.822
CNS0095602Golden flower (diploid) 29.587
CNS0095603Golden flower (diploid) 310.411
CNS0095604Slightly white alabastrum(tetraploid) 122.601
CNS0095605Slightly white alabastrum(tetraploid) 215.440
CNS0095606Slightly white alabastrum(tetraploid) 345.335
CNS0095607Whole white alabastrum(tetraploid) 112.517
CNS0095608Whole white alabastrum(tetraploid) 210.268
CNS0095609Whole white alabastrum(tetraploid) 327.852
CNS0095610Silvery flower (tetraploid) 16.642
CNS0095611Silvery flower (tetraploid) 29.620
CNS0095612Silvery flower (tetraploid) 37.835
CNS0095613Golden flower (tetraploid) 13.213
CNS0095614Golden flower (tetraploid) 211.489
CNS0095615Golden flower (tetraploid) 31.303
CRA001975CRR073297Stem 14.606
CRR073298Stem 28.307
CRR073299Stem 34.864
CRR073300Leaf 113.743
CRR073301Leaf 219.597
CRR073302Leaf 311.610
CRR073303Juvenile bud 112.186
CRR073304Juvenile bud 27.412
CRR073305Juvenile bud 310.018
CRR073306Third green 11.502
CRR073307Third green 21.753
CRR073308Third green 31.996
CRR073309Second white 11.771
CRR073310Second white 20.350
CRR073311Second white 31.820
CRR073312Silver flowering 11.018
CRR073313Silver flowering 21.432
CRR073314Silver flowering 30.594
CRR073315Gold flowering 12.981
CRR073316Gold flowering 24.573
CRR073317Gold flowering 33.170
CRR073318Tawny withering 131.465
CRR073319Tawny withering 228.803
CRR073320Tawny withering 315.280