Detail information of GWHGAAZE005356


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrXP_007026547.10RNI-like superfamily protein [Theobroma cacao]
Swissprottr|Q8S8P5|WRK33_ARATH5E-121Probable WRKY transcription factor 33
trEMBLtr|A0A061EXQ1|A0A061EXQ1_THECC0RNI-like superfamily protein {ECO:0000313|EMBL:EOY07049.1}
TAIR10AT2G38470.13E-95WRKY DNA-binding protein 33

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000002gene65905416592685+
GWHAAZE00000002mRNA65905416592685+
GWHAAZE00000002exon65905416590762+
GWHAAZE00000002exon65909006591037+
GWHAAZE00000002exon65912886591880+
GWHAAZE00000002exon65919876592148+
GWHAAZE00000002exon65922656592685+
GWHAAZE00000002CDS65905416590762+
GWHAAZE00000002CDS65909006591037+
GWHAAZE00000002CDS65912886591880+
GWHAAZE00000002CDS65919876592148+
GWHAAZE00000002CDS65922656592685+
Transcript Sequence

Network for GWHGAAZE005356

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation
CFinderModule0141Transcription factor WRKY family Transcription factor WRKY
GO:0043565 sequence-specific DNA binding GOslim:molecular_function
GO:0003700 DNA-binding transcription factor activity GOslim:molecular_function
GO:0006355 regulation of transcription, DNA-templated GOslim:biological_process


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF03106.16WRKY1862415.80E-24
PF03106.16WRKY3524092.20E-24
Protein Sequence

Gene family

Gene familysubfamily
Transcription Factors FamilyWRKY

KEGG pathway

KO Enzyme pathway mapID
K13424WRKY33 MAPK signaling pathway - plant map04016
Plant-pathogen interactionmap04626

Gene Ontology

GO term OntologyName
GO:0006355biological_processregulation of transcription, DNA-templated
GO:0003700molecular_functionDNA-binding transcription factor activity
GO:0043565molecular_functionsequence-specific DNA binding

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf79.528
SRR3591706second leaf24.213
SRR3591707mature leaf13.962
SRR3591708Shoot apex75.108
SRR3591709Stem186.902
SRR3591710White floral bud75.537
SRR3591711White flower125.662
SRR3591712Green floral bud25.473
SRR3591713Yellow flower97.003
SRP173429 SRR8316895Juvenile bud stage 95.060
SRR8316896Juvenile bud stage 23.649
SRR8316897Juvenile bud stage 71.222
SRR8316894Third green stage 22.947
SRR8316900Third green stage 19.558
SRR8316901Third green stage 32.515
SRR8316898Complete white stage 0.917
SRR8316899Complete white stage 60.940
SRR8316903Complete white stage 2.742
SRR8316902Silver flowering stage4.722
SRR8316904Silver flowering stage8.665
SRR8316905Silver flowering stage3.583
SRR8316906Gold flowering stage 33.506
SRR8316907Gold flowering stage 28.078
SRR8316908Gold flowering stage 67.942
SRP132670SRR6706286Control6.904
SRR6706287Light intensity 50%13.952
SRR6706288Light intensity 20%7.165
CNP0000432CNS0095592Slightly white alabastrum(diploid) 160.846
CNS0095593Slightly white alabastrum(diploid) 271.043
CNS0095594Slightly white alabastrum(diploid) 368.767
CNS0095595Whole white alabastrum(diploid) 237.853
CNS0095596Whole white alabastrum(diploid) 33.765
CNS0095597Whole white alabastrum(diploid) 445.541
CNS0095598Silvery flower (diploied) 1142.418
CNS0095599Silvery flower (diploied) 2118.376
CNS0095600Silvery flower (diploied) 356.895
CNS0095601Golden flower (diploid) 1152.579
CNS0095602Golden flower (diploid) 2117.822
CNS0095603Golden flower (diploid) 3114.732
CNS0095604Slightly white alabastrum(tetraploid) 10.219
CNS0095605Slightly white alabastrum(tetraploid) 20.311
CNS0095606Slightly white alabastrum(tetraploid) 31.277
CNS0095607Whole white alabastrum(tetraploid) 10.438
CNS0095608Whole white alabastrum(tetraploid) 20.157
CNS0095609Whole white alabastrum(tetraploid) 30.169
CNS0095610Silvery flower (tetraploid) 17.651
CNS0095611Silvery flower (tetraploid) 22.035
CNS0095612Silvery flower (tetraploid) 311.255
CNS0095613Golden flower (tetraploid) 113.424
CNS0095614Golden flower (tetraploid) 215.643
CNS0095615Golden flower (tetraploid) 38.058
CRA001975CRR073297Stem 127.920
CRR073298Stem 225.506
CRR073299Stem 315.109
CRR073300Leaf 133.336
CRR073301Leaf 248.867
CRR073302Leaf 37.815
CRR073303Juvenile bud 117.546
CRR073304Juvenile bud 219.979
CRR073305Juvenile bud 347.012
CRR073306Third green 14.020
CRR073307Third green 23.458
CRR073308Third green 37.606
CRR073309Second white 14.329
CRR073310Second white 211.997
CRR073311Second white 315.633
CRR073312Silver flowering 1113.453
CRR073313Silver flowering 280.999
CRR073314Silver flowering 352.198
CRR073315Gold flowering 133.384
CRR073316Gold flowering 267.599
CRR073317Gold flowering 383.258
CRR073318Tawny withering 178.999
CRR073319Tawny withering 2196.147
CRR073320Tawny withering 366.874