Detail information of GWHGAAZE005303


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrXP_007033491.10Malectin/receptor-like protein kinase family protein [Theobroma cacao]
Swissprottr|Q9SCZ4|FERON_ARATH0Receptor-like protein kinase FERONIA (Precursor)
trEMBLtr|A0A061EJ18|A0A061EJ18_THECC0Malectin/receptor-like protein kinase family protein {ECO:0000313|EMBL:EOY04417.1}
TAIR10AT3G51550.10Malectin/receptor-like protein kinase family protein

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000002gene57699895772667+
GWHAAZE00000002mRNA57699895772667+
GWHAAZE00000002exon57699895772667+
GWHAAZE00000002CDS57699895772667+
Transcript Sequence

Network for GWHGAAZE005303

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF12819.8Malectin_like384071.70E-36
PF07714.18PK_Tyr_Ser-Thr5428041.10E-48
Protein Sequence

Gene family

Gene familysubfamily
Protein Kinases FamilyRLK-Pelle_CrRLK1L-1

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0006468biological_processprotein phosphorylation
GO:0004672molecular_functionprotein kinase activity
GO:0005524molecular_functionATP binding

Expression pattern

Created with Highcharts 5.0.4Chart context menuExpression pattern for GWHGAAZE005303.youngest leafsecond leafmature leafShoot apexStemWhite floral budWhite flowerGreen floral budYellow flowerJuvenile bud stage 1Juvenile bud stage 2Juvenile bud stage 3Third green stage 1Third green stage 2Third green stage 3Complete white stage 1Complete white stage 2Complete white stage 3Silver flowering stage 1Silver flowering stage 2Silver flowering stage 3Gold flowering stage 1Gold flowering stage 2Gold flowering stage 3Control 1Light intensity 50%Light intensity 20%Slightly white alabastrum(diploid) 1Slightly white alabastrum(diploid) 2Slightly white alabastrum(diploid) 3Whole white alabastrum(diploid) 1Whole white alabastrum(diploid) 2Whole white alabastrum(diploid) 3Silvery flower (diploied) 1Silvery flower (diploied) 2Silvery flower (diploied) 3Golden flower (diploid) 1Golden flower (diploid) 2Golden flower (diploid) 3Slightly white alabastrum(tetraploid) 1Slightly white alabastrum(tetraploid) 2Slightly white alabastrum(tetraploid) 3Whole white alabastrum(tetraploid) 1Whole white alabastrum(tetraploid) 2Whole white alabastrum(tetraploid) 3Silvery flower (tetraploid) 1Silvery flower (tetraploid) 2Silvery flower (tetraploid) 3Golden flower (tetraploid) 1Golden flower (tetraploid) 2Golden flower (tetraploid) 3Stem 1Stem 2Stem 3Leaf 1Leaf 2Leaf 3Juvenile bud 1Juvenile bud 2Juvenile bud 3Third green 1Third green 2Third green 3Second white 1Second white 2Second white 3Silver flowering 1Silver flowering 2Silver flowering 3Gold flowering 1Gold flowering 2Gold flowering 3Tawny withering 1Tawny withering 2Tawny withering 30100200255075125150175225250275Highcharts.com

Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf128.269
SRR3591706second leaf48.363
SRR3591707mature leaf34.245
SRR3591708Shoot apex41.570
SRR3591709Stem102.118
SRR3591710White floral bud96.034
SRR3591711White flower82.178
SRR3591712Green floral bud77.020
SRR3591713Yellow flower46.024
SRP173429 SRR8316895Juvenile bud stage 75.599
SRR8316896Juvenile bud stage 73.565
SRR8316897Juvenile bud stage 57.625
SRR8316894Third green stage 27.372
SRR8316900Third green stage 72.105
SRR8316901Third green stage 82.276
SRR8316898Complete white stage 30.142
SRR8316899Complete white stage 140.459
SRR8316903Complete white stage 58.503
SRR8316902Silver flowering stage38.522
SRR8316904Silver flowering stage45.952
SRR8316905Silver flowering stage20.090
SRR8316906Gold flowering stage 51.507
SRR8316907Gold flowering stage 54.656
SRR8316908Gold flowering stage 57.937
SRP132670SRR6706286Control70.628
SRR6706287Light intensity 50%86.929
SRR6706288Light intensity 20%93.195
CNP0000432CNS0095592Slightly white alabastrum(diploid) 153.950
CNS0095593Slightly white alabastrum(diploid) 270.715
CNS0095594Slightly white alabastrum(diploid) 354.451
CNS0095595Whole white alabastrum(diploid) 256.318
CNS0095596Whole white alabastrum(diploid) 329.041
CNS0095597Whole white alabastrum(diploid) 452.531
CNS0095598Silvery flower (diploied) 185.862
CNS0095599Silvery flower (diploied) 276.309
CNS0095600Silvery flower (diploied) 3108.509
CNS0095601Golden flower (diploid) 174.312
CNS0095602Golden flower (diploid) 2126.349
CNS0095603Golden flower (diploid) 3120.734
CNS0095604Slightly white alabastrum(tetraploid) 134.982
CNS0095605Slightly white alabastrum(tetraploid) 226.671
CNS0095606Slightly white alabastrum(tetraploid) 387.793
CNS0095607Whole white alabastrum(tetraploid) 122.397
CNS0095608Whole white alabastrum(tetraploid) 220.763
CNS0095609Whole white alabastrum(tetraploid) 351.674
CNS0095610Silvery flower (tetraploid) 144.514
CNS0095611Silvery flower (tetraploid) 243.286
CNS0095612Silvery flower (tetraploid) 367.182
CNS0095613Golden flower (tetraploid) 117.061
CNS0095614Golden flower (tetraploid) 235.854
CNS0095615Golden flower (tetraploid) 333.149
CRA001975CRR073297Stem 1102.553
CRR073298Stem 291.993
CRR073299Stem 3100.472
CRR073300Leaf 1149.027
CRR073301Leaf 2155.544
CRR073302Leaf 3129.824
CRR073303Juvenile bud 1168.337
CRR073304Juvenile bud 2144.895
CRR073305Juvenile bud 3258.961
CRR073306Third green 1243.776
CRR073307Third green 2217.316
CRR073308Third green 3241.829
CRR073309Second white 1182.295
CRR073310Second white 2127.772
CRR073311Second white 3147.102
CRR073312Silver flowering 1187.581
CRR073313Silver flowering 2200.179
CRR073314Silver flowering 3154.738
CRR073315Gold flowering 1144.938
CRR073316Gold flowering 2243.718
CRR073317Gold flowering 3133.868
CRR073318Tawny withering 1176.524
CRR073319Tawny withering 2194.717
CRR073320Tawny withering 3201.259