Detail information of GWHGAAZE005096


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrCDO99844.10unnamed protein product [Coffea canephora]
Swissprottr|P22200|KPYC_SOLTU1E-131Pyruvate kinase, cytosolic isozyme
trEMBLtr|A0A068TV42|A0A068TV42_COFCA0Pyruvate kinase {ECO:0000256|RuleBase:RU000504}
TAIR10AT3G52990.10Pyruvate kinase family protein

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000002gene26226522638225-
GWHAAZE00000002mRNA26226522638225-
GWHAAZE00000002exon26381572638225-
GWHAAZE00000002exon26378912637987-
GWHAAZE00000002exon26371272637224-
GWHAAZE00000002exon26368342636993-
GWHAAZE00000002exon26360712636144-
GWHAAZE00000002exon26354952635626-
GWHAAZE00000002exon26349742635054-
GWHAAZE00000002exon26347092634780-
GWHAAZE00000002exon26344072634496-
GWHAAZE00000002exon26328642633008-
GWHAAZE00000002exon26325402632628-
GWHAAZE00000002exon26239742624069-
GWHAAZE00000002exon26238132623880-
GWHAAZE00000002exon26234552623554-
GWHAAZE00000002exon26229132622972-
GWHAAZE00000002exon26226522622804-
GWHAAZE00000002CDS26381572638225-
GWHAAZE00000002CDS26378912637987-
GWHAAZE00000002CDS26371272637224-
GWHAAZE00000002CDS26368342636993-
GWHAAZE00000002CDS26360712636144-
GWHAAZE00000002CDS26354952635626-
GWHAAZE00000002CDS26349742635054-
GWHAAZE00000002CDS26347092634780-
GWHAAZE00000002CDS26344072634496-
GWHAAZE00000002CDS26328642633008-
GWHAAZE00000002CDS26325402632628-
GWHAAZE00000002CDS26239742624069-
GWHAAZE00000002CDS26238132623880-
GWHAAZE00000002CDS26234552623554-
GWHAAZE00000002CDS26229132622972-
GWHAAZE00000002CDS26226522622804-
Transcript Sequence

Network for GWHGAAZE005096

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00224.22PK303741.30E-92
PF02887.17PK_C3955225.10E-24
Protein Sequence

Gene family

Gene familysubfamily
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KEGG pathway

KO Enzyme pathway mapID
K00873PK, pyk Metabolic pathways map01100
Biosynthesis of secondary metabolitesmap01110
Microbial metabolism in diverse environmentsmap01120
Carbon metabolismmap01200
Biosynthesis of amino acidsmap01230
Glycolysis / Gluconeogenesismap00010
Pyruvate metabolismmap00620
Purine metabolismmap00230
Glucagon signaling pathwaymap04922

Gene Ontology

GO term OntologyName
GO:0006096biological_processglycolytic process
GO:0000287molecular_functionmagnesium ion binding
GO:0004743molecular_functionpyruvate kinase activity
GO:0030955molecular_functionpotassium ion binding
GO:0003824molecular_functioncatalytic activity

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf130.676
SRR3591706second leaf28.513
SRR3591707mature leaf14.197
SRR3591708Shoot apex64.462
SRR3591709Stem104.180
SRR3591710White floral bud64.475
SRR3591711White flower59.275
SRR3591712Green floral bud84.021
SRR3591713Yellow flower34.886
SRP173429 SRR8316895Juvenile bud stage 57.268
SRR8316896Juvenile bud stage 85.874
SRR8316897Juvenile bud stage 38.489
SRR8316894Third green stage 33.254
SRR8316900Third green stage 106.053
SRR8316901Third green stage 97.811
SRR8316898Complete white stage 47.478
SRR8316899Complete white stage 131.559
SRR8316903Complete white stage 72.518
SRR8316902Silver flowering stage31.950
SRR8316904Silver flowering stage52.994
SRR8316905Silver flowering stage25.181
SRR8316906Gold flowering stage 65.010
SRR8316907Gold flowering stage 72.499
SRR8316908Gold flowering stage 78.685
SRP132670SRR6706286Control67.713
SRR6706287Light intensity 50%65.196
SRR6706288Light intensity 20%73.025
CNP0000432CNS0095592Slightly white alabastrum(diploid) 159.086
CNS0095593Slightly white alabastrum(diploid) 273.006
CNS0095594Slightly white alabastrum(diploid) 362.866
CNS0095595Whole white alabastrum(diploid) 260.190
CNS0095596Whole white alabastrum(diploid) 359.753
CNS0095597Whole white alabastrum(diploid) 465.651
CNS0095598Silvery flower (diploied) 148.304
CNS0095599Silvery flower (diploied) 258.199
CNS0095600Silvery flower (diploied) 396.181
CNS0095601Golden flower (diploid) 145.403
CNS0095602Golden flower (diploid) 272.138
CNS0095603Golden flower (diploid) 366.385
CNS0095604Slightly white alabastrum(tetraploid) 1100.936
CNS0095605Slightly white alabastrum(tetraploid) 285.934
CNS0095606Slightly white alabastrum(tetraploid) 3145.713
CNS0095607Whole white alabastrum(tetraploid) 172.898
CNS0095608Whole white alabastrum(tetraploid) 271.457
CNS0095609Whole white alabastrum(tetraploid) 3134.037
CNS0095610Silvery flower (tetraploid) 1115.788
CNS0095611Silvery flower (tetraploid) 2126.158
CNS0095612Silvery flower (tetraploid) 3118.451
CNS0095613Golden flower (tetraploid) 135.653
CNS0095614Golden flower (tetraploid) 276.154
CNS0095615Golden flower (tetraploid) 333.026
CRA001975CRR073297Stem 175.894
CRR073298Stem 269.872
CRR073299Stem 376.683
CRR073300Leaf 1100.746
CRR073301Leaf 297.099
CRR073302Leaf 395.218
CRR073303Juvenile bud 1112.489
CRR073304Juvenile bud 291.943
CRR073305Juvenile bud 3134.011
CRR073306Third green 163.385
CRR073307Third green 257.694
CRR073308Third green 357.566
CRR073309Second white 151.811
CRR073310Second white 234.510
CRR073311Second white 332.531
CRR073312Silver flowering 117.734
CRR073313Silver flowering 223.332
CRR073314Silver flowering 319.598
CRR073315Gold flowering 19.498
CRR073316Gold flowering 213.295
CRR073317Gold flowering 315.625
CRR073318Tawny withering 1102.707
CRR073319Tawny withering 287.686
CRR073320Tawny withering 397.002