Detail information of GWHGAAZE004831


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrXP_011037651.10PREDICTED: peroxidase 42 [Populus euphratica]
Swissprottr|Q9SB81|PER42_ARATH6E-180Peroxidase 42 (Precursor)
trEMBLtr|C7DYB2|C7DYB2_9ERIC0Peroxidase {ECO:0000313|EMBL:ACT21094.1}
TAIR10AT4G21960.12E-139Peroxidase superfamily protein

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000001gene123044213123046066-
GWHAAZE00000001mRNA123044213123046066-
GWHAAZE00000001exon123044213123044698-
GWHAAZE00000001exon123044989123045141-
GWHAAZE00000001exon123045528123045655-
GWHAAZE00000001exon123045751123046066-
GWHAAZE00000001CDS123045751123046066-
GWHAAZE00000001CDS123045528123045655-
GWHAAZE00000001CDS123044989123045141-
GWHAAZE00000001CDS123044213123044698-
Transcript Sequence

Network for GWHGAAZE004831

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00141.24peroxidase523214.00E-47
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K00430E1.11.1.7 Metabolic pathways map01100
Biosynthesis of secondary metabolitesmap01110
Phenylpropanoid biosynthesismap00940

Gene Ontology

GO term OntologyName
GO:0042744biological_processhydrogen peroxide catabolic process
GO:0006979biological_processresponse to oxidative stress
GO:0055114biological_processoxidation-reduction process
GO:0004601molecular_functionperoxidase activity
GO:0020037molecular_functionheme binding

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf1078.016
SRR3591706second leaf1940.780
SRR3591707mature leaf486.595
SRR3591708Shoot apex1721.059
SRR3591709Stem1209.457
SRR3591710White floral bud67.077
SRR3591711White flower40.872
SRR3591712Green floral bud314.512
SRR3591713Yellow flower4.502
SRP173429 SRR8316895Juvenile bud stage 275.832
SRR8316896Juvenile bud stage 210.808
SRR8316897Juvenile bud stage 151.155
SRR8316894Third green stage 98.614
SRR8316900Third green stage 124.049
SRR8316901Third green stage 131.358
SRR8316898Complete white stage 3.204
SRR8316899Complete white stage 50.285
SRR8316903Complete white stage 12.700
SRR8316902Silver flowering stage0.669
SRR8316904Silver flowering stage3.661
SRR8316905Silver flowering stage0.906
SRR8316906Gold flowering stage 0.829
SRR8316907Gold flowering stage 3.076
SRR8316908Gold flowering stage 5.939
SRP132670SRR6706286Control153.593
SRR6706287Light intensity 50%152.193
SRR6706288Light intensity 20%155.442
CNP0000432CNS0095592Slightly white alabastrum(diploid) 1238.279
CNS0095593Slightly white alabastrum(diploid) 2250.525
CNS0095594Slightly white alabastrum(diploid) 3158.920
CNS0095595Whole white alabastrum(diploid) 2103.530
CNS0095596Whole white alabastrum(diploid) 3134.858
CNS0095597Whole white alabastrum(diploid) 489.662
CNS0095598Silvery flower (diploied) 157.269
CNS0095599Silvery flower (diploied) 266.891
CNS0095600Silvery flower (diploied) 324.976
CNS0095601Golden flower (diploid) 139.938
CNS0095602Golden flower (diploid) 234.582
CNS0095603Golden flower (diploid) 333.858
CNS0095604Slightly white alabastrum(tetraploid) 1223.095
CNS0095605Slightly white alabastrum(tetraploid) 2219.098
CNS0095606Slightly white alabastrum(tetraploid) 3535.299
CNS0095607Whole white alabastrum(tetraploid) 161.768
CNS0095608Whole white alabastrum(tetraploid) 236.407
CNS0095609Whole white alabastrum(tetraploid) 3115.196
CNS0095610Silvery flower (tetraploid) 112.342
CNS0095611Silvery flower (tetraploid) 237.913
CNS0095612Silvery flower (tetraploid) 314.514
CNS0095613Golden flower (tetraploid) 12.692
CNS0095614Golden flower (tetraploid) 26.357
CNS0095615Golden flower (tetraploid) 33.426
CRA001975CRR073297Stem 1857.283
CRR073298Stem 2713.635
CRR073299Stem 31369.264
CRR073300Leaf 1205.389
CRR073301Leaf 2230.705
CRR073302Leaf 3518.644
CRR073303Juvenile bud 1121.855
CRR073304Juvenile bud 289.217
CRR073305Juvenile bud 3107.899
CRR073306Third green 14.815
CRR073307Third green 211.300
CRR073308Third green 37.119
CRR073309Second white 17.583
CRR073310Second white 20.509
CRR073311Second white 31.120
CRR073312Silver flowering 10.372
CRR073313Silver flowering 20.749
CRR073314Silver flowering 31.119
CRR073315Gold flowering 1142.963
CRR073316Gold flowering 2133.141
CRR073317Gold flowering 3205.563
CRR073318Tawny withering 11494.714
CRR073319Tawny withering 2833.602
CRR073320Tawny withering 31478.014