Detail information of GWHGAAZE004822


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrXP_009602630.13.2673E-153PREDICTED: derlin-2.2 [Nicotiana tomentosiformis]
Swissprottr|Q9ZS88|DER22_ARATH3E-145Derlin-2.2
trEMBLtr|K4B9Q9|K4B9Q9_SOLLC3E-152Uncharacterized protein {ECO:0000313|EnsemblPlants:Solyc02g080380.2.1}
TAIR10AT4G04860.11E-115DERLIN-2.2

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000001gene122860618122864231-
GWHAAZE00000001mRNA122860618122864231-
GWHAAZE00000001exon122860618122860800-
GWHAAZE00000001exon122861393122861446-
GWHAAZE00000001exon122862285122862368-
GWHAAZE00000001exon122862474122862723-
GWHAAZE00000001exon122863035122863167-
GWHAAZE00000001exon122863790122863889-
GWHAAZE00000001exon122864133122864231-
GWHAAZE00000001CDS122864133122864231-
GWHAAZE00000001CDS122863790122863889-
GWHAAZE00000001CDS122863035122863167-
GWHAAZE00000001CDS122862474122862723-
GWHAAZE00000001CDS122862285122862368-
GWHAAZE00000001CDS122861393122861446-
GWHAAZE00000001CDS122860618122860800-
Transcript Sequence

Network for GWHGAAZE004822

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF04511.16DER112661.10E-15
PF04511.16DER11212671.30E-39
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K13989DERL2_3 Protein processing in endoplasmic reticulum map04141

Gene Ontology

GO term OntologyName

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf49.389
SRR3591706second leaf38.651
SRR3591707mature leaf37.233
SRR3591708Shoot apex46.402
SRR3591709Stem50.429
SRR3591710White floral bud57.804
SRR3591711White flower56.158
SRR3591712Green floral bud57.755
SRR3591713Yellow flower46.541
SRP173429 SRR8316895Juvenile bud stage 30.963
SRR8316896Juvenile bud stage 36.368
SRR8316897Juvenile bud stage 18.211
SRR8316894Third green stage 12.862
SRR8316900Third green stage 51.747
SRR8316901Third green stage 44.651
SRR8316898Complete white stage 22.218
SRR8316899Complete white stage 69.789
SRR8316903Complete white stage 31.698
SRR8316902Silver flowering stage21.601
SRR8316904Silver flowering stage24.133
SRR8316905Silver flowering stage11.245
SRR8316906Gold flowering stage 43.657
SRR8316907Gold flowering stage 36.363
SRR8316908Gold flowering stage 42.777
SRP132670SRR6706286Control17.907
SRR6706287Light intensity 50%17.303
SRR6706288Light intensity 20%20.383
CNP0000432CNS0095592Slightly white alabastrum(diploid) 140.797
CNS0095593Slightly white alabastrum(diploid) 241.303
CNS0095594Slightly white alabastrum(diploid) 337.850
CNS0095595Whole white alabastrum(diploid) 241.151
CNS0095596Whole white alabastrum(diploid) 345.408
CNS0095597Whole white alabastrum(diploid) 444.881
CNS0095598Silvery flower (diploied) 141.341
CNS0095599Silvery flower (diploied) 234.112
CNS0095600Silvery flower (diploied) 360.402
CNS0095601Golden flower (diploid) 131.092
CNS0095602Golden flower (diploid) 251.336
CNS0095603Golden flower (diploid) 350.285
CNS0095604Slightly white alabastrum(tetraploid) 138.821
CNS0095605Slightly white alabastrum(tetraploid) 239.984
CNS0095606Slightly white alabastrum(tetraploid) 355.927
CNS0095607Whole white alabastrum(tetraploid) 141.080
CNS0095608Whole white alabastrum(tetraploid) 237.361
CNS0095609Whole white alabastrum(tetraploid) 353.528
CNS0095610Silvery flower (tetraploid) 161.524
CNS0095611Silvery flower (tetraploid) 257.642
CNS0095612Silvery flower (tetraploid) 354.988
CNS0095613Golden flower (tetraploid) 142.879
CNS0095614Golden flower (tetraploid) 244.594
CNS0095615Golden flower (tetraploid) 353.920
CRA001975CRR073297Stem 118.694
CRR073298Stem 219.931
CRR073299Stem 318.834
CRR073300Leaf 121.846
CRR073301Leaf 218.252
CRR073302Leaf 323.714
CRR073303Juvenile bud 128.384
CRR073304Juvenile bud 222.511
CRR073305Juvenile bud 328.158
CRR073306Third green 113.987
CRR073307Third green 211.563
CRR073308Third green 310.952
CRR073309Second white 123.991
CRR073310Second white 215.535
CRR073311Second white 315.083
CRR073312Silver flowering 117.066
CRR073313Silver flowering 220.307
CRR073314Silver flowering 310.002
CRR073315Gold flowering 121.486
CRR073316Gold flowering 230.544
CRR073317Gold flowering 330.258
CRR073318Tawny withering 117.721
CRR073319Tawny withering 219.258
CRR073320Tawny withering 316.356