Detail information of GWHGAAZE004564


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrCDO96813.10unnamed protein product [Coffea canephora]
Swissprottr|Q9SN43|CIPKC_ARATH0CBL-interacting serine/threonine-protein kinase 12
trEMBLtr|A0A068TN81|A0A068TN81_COFCA0Coffea canephora DH200=94 genomic scaffold, scaffold_1 {ECO:0000313|EMBL:CDO96813.1}
TAIR10AT4G18700.10CBL-interacting protein kinase 12

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000001gene118926332118927765-
GWHAAZE00000001mRNA118926332118927765-
GWHAAZE00000001exon118926332118927765-
GWHAAZE00000001CDS118926332118927765-
Transcript Sequence

Network for GWHGAAZE004564

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00069.26Pkinase312853.30E-76
PF03822.15NAF3413971.30E-24
Protein Sequence

Gene family

Gene familysubfamily
Protein Kinases FamilyCAMK_CAMKL-CHK1

KEGG pathway

KO Enzyme pathway mapID
K07198PRKAA, AMPK Apelin signaling pathway map04371
FoxO signaling pathwaymap04068
PI3K-Akt signaling pathwaymap04151
AMPK signaling pathwaymap04152
mTOR signaling pathwaymap04150
Autophagy - animalmap04140
Tight junctionmap04530
Insulin signaling pathwaymap04910
Glucagon signaling pathwaymap04922
Adipocytokine signaling pathwaymap04920
Oxytocin signaling pathwaymap04921
Axon regenerationmap04361
Longevity regulating pathwaymap04211
Longevity regulating pathway - multiple speciesmap04213
Circadian rhythmmap04710
Thermogenesismap04714

Gene Ontology

GO term OntologyName
GO:0006468biological_processprotein phosphorylation
GO:0007165biological_processsignal transduction
GO:0004672molecular_functionprotein kinase activity
GO:0005524molecular_functionATP binding

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf20.955
SRR3591706second leaf15.371
SRR3591707mature leaf29.654
SRR3591708Shoot apex14.022
SRR3591709Stem22.727
SRR3591710White floral bud30.122
SRR3591711White flower35.662
SRR3591712Green floral bud26.213
SRR3591713Yellow flower23.748
SRP173429 SRR8316895Juvenile bud stage 15.313
SRR8316896Juvenile bud stage 17.881
SRR8316897Juvenile bud stage 8.315
SRR8316894Third green stage 8.714
SRR8316900Third green stage 25.968
SRR8316901Third green stage 24.851
SRR8316898Complete white stage 16.945
SRR8316899Complete white stage 47.501
SRR8316903Complete white stage 25.519
SRR8316902Silver flowering stage17.376
SRR8316904Silver flowering stage25.777
SRR8316905Silver flowering stage11.533
SRR8316906Gold flowering stage 31.401
SRR8316907Gold flowering stage 28.751
SRR8316908Gold flowering stage 34.721
SRP132670SRR6706286Control34.077
SRR6706287Light intensity 50%34.744
SRR6706288Light intensity 20%37.050
CNP0000432CNS0095592Slightly white alabastrum(diploid) 116.611
CNS0095593Slightly white alabastrum(diploid) 216.551
CNS0095594Slightly white alabastrum(diploid) 318.245
CNS0095595Whole white alabastrum(diploid) 217.391
CNS0095596Whole white alabastrum(diploid) 318.236
CNS0095597Whole white alabastrum(diploid) 416.362
CNS0095598Silvery flower (diploied) 125.471
CNS0095599Silvery flower (diploied) 216.504
CNS0095600Silvery flower (diploied) 333.174
CNS0095601Golden flower (diploid) 117.697
CNS0095602Golden flower (diploid) 231.916
CNS0095603Golden flower (diploid) 332.748
CNS0095604Slightly white alabastrum(tetraploid) 120.420
CNS0095605Slightly white alabastrum(tetraploid) 216.033
CNS0095606Slightly white alabastrum(tetraploid) 333.669
CNS0095607Whole white alabastrum(tetraploid) 114.692
CNS0095608Whole white alabastrum(tetraploid) 213.111
CNS0095609Whole white alabastrum(tetraploid) 323.974
CNS0095610Silvery flower (tetraploid) 137.936
CNS0095611Silvery flower (tetraploid) 236.199
CNS0095612Silvery flower (tetraploid) 335.011
CNS0095613Golden flower (tetraploid) 119.671
CNS0095614Golden flower (tetraploid) 232.776
CNS0095615Golden flower (tetraploid) 334.782
CRA001975CRR073297Stem 124.487
CRR073298Stem 223.413
CRR073299Stem 325.047
CRR073300Leaf 131.213
CRR073301Leaf 226.321
CRR073302Leaf 322.998
CRR073303Juvenile bud 126.909
CRR073304Juvenile bud 223.740
CRR073305Juvenile bud 333.891
CRR073306Third green 133.731
CRR073307Third green 229.432
CRR073308Third green 332.233
CRR073309Second white 125.386
CRR073310Second white 229.121
CRR073311Second white 332.334
CRR073312Silver flowering 126.835
CRR073313Silver flowering 223.245
CRR073314Silver flowering 331.188
CRR073315Gold flowering 121.237
CRR073316Gold flowering 223.276
CRR073317Gold flowering 318.907
CRR073318Tawny withering 127.053
CRR073319Tawny withering 219.455
CRR073320Tawny withering 330.494