Gene detail

Detail information of GWHGAAZE004161

Functional Annotation

Database	Orthologs	E value	Annotation
Nr	XP_010250974.1	5.2486E-120	PREDICTED: cytochrome P450 86B1-like [Nelumbo nucifera]
COG	YP_004448498.1	2E-31	monooxygenase
Swissprot	tr\|Q9FMY1\|C86B1_ARATH	9E-94	Cytochrome P450 86B1
trEMBL	tr\|D7TU84\|D7TU84_VITVI	1E-119	Putative uncharacterized protein {ECO:0000313\|EMBL:CBI34058.3}
TAIR10	AT1G24540.1	1E-85	cytochrome P450, family 86, subfamily C, polypeptide 1

Location And Transcript Sequence (JBrowse)

Scaffold	Type	Start	End	Strand
GWHAAZE00000001	gene	112461307	112462074	-
GWHAAZE00000001	mRNA	112461307	112462074	-
GWHAAZE00000001	exon	112461811	112462074	-
GWHAAZE00000001	exon	112461307	112461771	-
GWHAAZE00000001	CDS	112461811	112462074	-
GWHAAZE00000001	CDS	112461307	112461771	-

Transcript Sequence
>GWHTAAZE004167 ATGGAAATTCTGAACAACCCCGGTGAGTTTAACGACCGATCCGATCTCTTGTCAAGGCTTATCAGGATAGAATCTACAAACCAAAATGGTTTGAAAAAATATTTCTCTAATAAGTTACTTAAAGATTTTTGCATAAGTTTTATTCTAGCAGGGAGAGACACTAGCTCTGTGGGCTTAGCCTGGTTCTTTTGGCTGATACATAAAAACCCACAGGTGGAAACAAGCATTCTTGATGAAATTAAGCGAATTATTGCCCACCGAAAGGATGAGTTAAAAGAGATGGTCTATTTACATGCTGCAATATCCGAATCTTTGAGGCTTTACCCTCCGGTTCCTATCGATTTTAAGGAGGTTTTAGAGGACGATTTGTTCCCCGATGGAACGGTGATTAGGCGAGGGGATCGAGTTCTGTACTCCATTTACTCGATGGCTCGATTGGAGTCAATTTGGGGAAAGGATTGCAATGAGTTCAAGCCAGAGAGGTGGATAAAAGATGGTGAATTTGTGAGTGAGAATCAGTTTAAGTATGTTGTGTTTAATGGAGGGCCAAGATTGTGTGTGGGGAAGAAGTTTGCTTATATGCAGATGAAAATGGTGGCTGCTTCAATTGTGTTGAGGTATTCAGTTAAGGTTGTTGAAGGGCATGAAGTTTGTCCAAAGGTGACTACTACTCTTTATATGAAGAATGGGCTTTTGGTGAATTTGGAGCCTAGGGTCAACCTCTTCTGA

Network for GWHGAAZE004161

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF00067.23	p450	11	224	2.70E-50

Protein Sequence

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	pathway	mapID
K15402	CYP86B1	Cutin, suberine and wax biosynthesis	map00073

Gene Ontology

GO term	Ontology	Name
GO:0055114	biological_process	oxidation-reduction process
GO:0005506	molecular_function	iron ion binding
GO:0016705	molecular_function	oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen
GO:0020037	molecular_function	heme binding

Expression pattern

Expression pattern detail

SRP	Sample	Description	TPM
SRP075780	SRR3591705	youngest leaf	0.851
	SRR3591706	second leaf	0.278
	SRR3591707	mature leaf	0.000
	SRR3591708	Shoot apex	0.553
	SRR3591709	Stem	0.540
	SRR3591710	White floral bud	0.635
	SRR3591711	White flower	0.516
	SRR3591712	Green floral bud	0.384
	SRR3591713	Yellow flower	0.212
SRP173429	SRR8316895	Juvenile bud stage	2.397
	SRR8316896	Juvenile bud stage	2.694
	SRR8316897	Juvenile bud stage	0.939
	SRR8316894	Third green stage	0.475
	SRR8316900	Third green stage	0.517
	SRR8316901	Third green stage	0.567
	SRR8316898	Complete white stage	0.000
	SRR8316899	Complete white stage	0.086
	SRR8316903	Complete white stage	0.000
	SRR8316902	Silver flowering stage	0.347
	SRR8316904	Silver flowering stage	0.741
	SRR8316905	Silver flowering stage	0.130
	SRR8316906	Gold flowering stage	1.150
	SRR8316907	Gold flowering stage	0.677
	SRR8316908	Gold flowering stage	0.049
SRP132670	SRR6706286	Control	0.169
	SRR6706287	Light intensity 50%	0.173
	SRR6706288	Light intensity 20%	0.143
CNP0000432	CNS0095592	Slightly white alabastrum(diploid) 1	0.183
	CNS0095593	Slightly white alabastrum(diploid) 2	0.000
	CNS0095594	Slightly white alabastrum(diploid) 3	0.461
	CNS0095595	Whole white alabastrum(diploid) 2	0.157
	CNS0095596	Whole white alabastrum(diploid) 3	0.115
	CNS0095597	Whole white alabastrum(diploid) 4	0.258
	CNS0095598	Silvery flower (diploied) 1	0.209
	CNS0095599	Silvery flower (diploied) 2	0.098
	CNS0095600	Silvery flower (diploied) 3	0.036
	CNS0095601	Golden flower (diploid) 1	0.000
	CNS0095602	Golden flower (diploid) 2	0.000
	CNS0095603	Golden flower (diploid) 3	0.069
	CNS0095604	Slightly white alabastrum(tetraploid) 1	0.250
	CNS0095605	Slightly white alabastrum(tetraploid) 2	0.304
	CNS0095606	Slightly white alabastrum(tetraploid) 3	0.039
	CNS0095607	Whole white alabastrum(tetraploid) 1	0.796
	CNS0095608	Whole white alabastrum(tetraploid) 2	0.155
	CNS0095609	Whole white alabastrum(tetraploid) 3	2.121
	CNS0095610	Silvery flower (tetraploid) 1	0.445
	CNS0095611	Silvery flower (tetraploid) 2	0.000
	CNS0095612	Silvery flower (tetraploid) 3	0.000
	CNS0095613	Golden flower (tetraploid) 1	0.148
	CNS0095614	Golden flower (tetraploid) 2	0.058
	CNS0095615	Golden flower (tetraploid) 3	0.000
CRA001975	CRR073297	Stem 1	6.326
	CRR073298	Stem 2	1.537
	CRR073299	Stem 3	9.571
	CRR073300	Leaf 1	0.000
	CRR073301	Leaf 2	0.000
	CRR073302	Leaf 3	0.043
	CRR073303	Juvenile bud 1	0.000
	CRR073304	Juvenile bud 2	0.000
	CRR073305	Juvenile bud 3	0.000
	CRR073306	Third green 1	0.647
	CRR073307	Third green 2	0.538
	CRR073308	Third green 3	0.635
	CRR073309	Second white 1	0.422
	CRR073310	Second white 2	0.082
	CRR073311	Second white 3	0.256
	CRR073312	Silver flowering 1	0.197
	CRR073313	Silver flowering 2	0.690
	CRR073314	Silver flowering 3	0.873
	CRR073315	Gold flowering 1	0.000
	CRR073316	Gold flowering 2	0.000
	CRR073317	Gold flowering 3	0.000
	CRR073318	Tawny withering 1	0.309
	CRR073319	Tawny withering 2	0.000
	CRR073320	Tawny withering 3	0.000