Detail information of GWHGAAZE003960


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrKHN38811.11.7391E-118Putative S-acyltransferase, partial [Glycine soja]
Swissprottr|Q5PNZ1|ZDH21_ARATH3E-79Probable protein S-acyltransferase 3
trEMBLtr|M4CK61|M4CK61_BRARP3E-102S-acyltransferase {ECO:0000256|RuleBase:RU079119}
TAIR10AT3G56930.23E-72DHHC-type zinc finger family protein

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000001gene107873010107876775-
GWHAAZE00000001mRNA107873010107876775-
GWHAAZE00000001exon107876506107876775-
GWHAAZE00000001exon107876101107876403-
GWHAAZE00000001exon107873010107873450-
GWHAAZE00000001CDS107876506107876775-
GWHAAZE00000001CDS107876101107876403-
GWHAAZE00000001CDS107873010107873450-
Transcript Sequence

Network for GWHGAAZE003960

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF01529.21DHHC1521979.40E-20
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K16675ZDHHC9_14_18 Hippo signaling pathway - fly map04391

Gene Ontology

GO term OntologyName
GO:0016409molecular_functionpalmitoyltransferase activity

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf0.164
SRR3591706second leaf0.000
SRR3591707mature leaf0.000
SRR3591708Shoot apex0.093
SRR3591709Stem0.992
SRR3591710White floral bud170.940
SRR3591711White flower8.523
SRR3591712Green floral bud142.758
SRR3591713Yellow flower6.902
SRP173429 SRR8316895Juvenile bud stage 1.411
SRR8316896Juvenile bud stage 16.768
SRR8316897Juvenile bud stage 5.860
SRR8316894Third green stage 10.141
SRR8316900Third green stage 64.022
SRR8316901Third green stage 59.623
SRR8316898Complete white stage 0.263
SRR8316899Complete white stage 0.616
SRR8316903Complete white stage 0.404
SRR8316902Silver flowering stage1.985
SRR8316904Silver flowering stage3.505
SRR8316905Silver flowering stage1.041
SRR8316906Gold flowering stage 0.520
SRR8316907Gold flowering stage 0.074
SRR8316908Gold flowering stage 0.000
SRP132670SRR6706286Control18.728
SRR6706287Light intensity 50%21.070
SRR6706288Light intensity 20%19.583
CNP0000432CNS0095592Slightly white alabastrum(diploid) 158.208
CNS0095593Slightly white alabastrum(diploid) 246.982
CNS0095594Slightly white alabastrum(diploid) 369.526
CNS0095595Whole white alabastrum(diploid) 2173.514
CNS0095596Whole white alabastrum(diploid) 3198.458
CNS0095597Whole white alabastrum(diploid) 4241.327
CNS0095598Silvery flower (diploied) 16.455
CNS0095599Silvery flower (diploied) 225.815
CNS0095600Silvery flower (diploied) 36.595
CNS0095601Golden flower (diploid) 18.531
CNS0095602Golden flower (diploid) 25.295
CNS0095603Golden flower (diploid) 34.208
CNS0095604Slightly white alabastrum(tetraploid) 1122.240
CNS0095605Slightly white alabastrum(tetraploid) 2139.074
CNS0095606Slightly white alabastrum(tetraploid) 30.236
CNS0095607Whole white alabastrum(tetraploid) 1279.827
CNS0095608Whole white alabastrum(tetraploid) 2344.915
CNS0095609Whole white alabastrum(tetraploid) 3132.593
CNS0095610Silvery flower (tetraploid) 11.958
CNS0095611Silvery flower (tetraploid) 217.577
CNS0095612Silvery flower (tetraploid) 338.437
CNS0095613Golden flower (tetraploid) 17.452
CNS0095614Golden flower (tetraploid) 21.081
CNS0095615Golden flower (tetraploid) 323.567
CRA001975CRR073297Stem 15.567
CRR073298Stem 24.961
CRR073299Stem 32.037
CRR073300Leaf 131.060
CRR073301Leaf 216.646
CRR073302Leaf 37.461
CRR073303Juvenile bud 126.351
CRR073304Juvenile bud 218.817
CRR073305Juvenile bud 32.188
CRR073306Third green 19.711
CRR073307Third green 211.534
CRR073308Third green 39.969
CRR073309Second white 10.736
CRR073310Second white 24.160
CRR073311Second white 33.203
CRR073312Silver flowering 112.536
CRR073313Silver flowering 210.690
CRR073314Silver flowering 36.584
CRR073315Gold flowering 114.078
CRR073316Gold flowering 24.707
CRR073317Gold flowering 34.019
CRR073318Tawny withering 116.807
CRR073319Tawny withering 214.651
CRR073320Tawny withering 317.477