Detail information of GWHGAAZE003839


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrCDX84588.15.74225E-36BnaA03g16420D [Brassica napus]
trEMBLtr|A0A078DB92|A0A078DB92_BRANA2E-36BnaA03g16420D protein {ECO:0000313|EMBL:CDX84588.1}
TAIR10AT2G35920.15E-27RNA helicase family protein

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000001gene105526733105528284-
GWHAAZE00000001mRNA105526733105528284-
GWHAAZE00000001exon105526733105526882-
GWHAAZE00000001exon105528099105528284-
GWHAAZE00000001CDS105528099105528284-
GWHAAZE00000001CDS105526733105526882-
Transcript Sequence

Network for GWHGAAZE003839

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
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Protein Sequence

Gene family

Gene familysubfamily
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KEGG pathway

KO Enzyme pathway mapID
K14442DHX36, RHAU RNA degradation map03018

Gene Ontology

GO term OntologyName

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf12.241
SRR3591706second leaf5.267
SRR3591707mature leaf7.195
SRR3591708Shoot apex9.483
SRR3591709Stem5.847
SRR3591710White floral bud6.673
SRR3591711White flower10.428
SRR3591712Green floral bud5.731
SRR3591713Yellow flower5.586
SRP173429 SRR8316895Juvenile bud stage 5.577
SRR8316896Juvenile bud stage 8.193
SRR8316897Juvenile bud stage 4.090
SRR8316894Third green stage 5.627
SRR8316900Third green stage 8.770
SRR8316901Third green stage 8.406
SRR8316898Complete white stage 1.064
SRR8316899Complete white stage 11.851
SRR8316903Complete white stage 4.191
SRR8316902Silver flowering stage2.028
SRR8316904Silver flowering stage2.708
SRR8316905Silver flowering stage1.670
SRR8316906Gold flowering stage 4.507
SRR8316907Gold flowering stage 6.963
SRR8316908Gold flowering stage 6.223
SRP132670SRR6706286Control31.859
SRR6706287Light intensity 50%26.402
SRR6706288Light intensity 20%25.527
CNP0000432CNS0095592Slightly white alabastrum(diploid) 11.708
CNS0095593Slightly white alabastrum(diploid) 21.066
CNS0095594Slightly white alabastrum(diploid) 32.766
CNS0095595Whole white alabastrum(diploid) 25.968
CNS0095596Whole white alabastrum(diploid) 34.069
CNS0095597Whole white alabastrum(diploid) 44.023
CNS0095598Silvery flower (diploied) 16.545
CNS0095599Silvery flower (diploied) 25.383
CNS0095600Silvery flower (diploied) 39.726
CNS0095601Golden flower (diploid) 15.348
CNS0095602Golden flower (diploid) 211.321
CNS0095603Golden flower (diploid) 311.756
CNS0095604Slightly white alabastrum(tetraploid) 15.360
CNS0095605Slightly white alabastrum(tetraploid) 26.863
CNS0095606Slightly white alabastrum(tetraploid) 315.575
CNS0095607Whole white alabastrum(tetraploid) 16.025
CNS0095608Whole white alabastrum(tetraploid) 24.598
CNS0095609Whole white alabastrum(tetraploid) 317.011
CNS0095610Silvery flower (tetraploid) 111.142
CNS0095611Silvery flower (tetraploid) 26.993
CNS0095612Silvery flower (tetraploid) 34.995
CNS0095613Golden flower (tetraploid) 11.462
CNS0095614Golden flower (tetraploid) 210.079
CNS0095615Golden flower (tetraploid) 35.920
CRA001975CRR073297Stem 110.127
CRR073298Stem 28.137
CRR073299Stem 38.482
CRR073300Leaf 17.355
CRR073301Leaf 27.506
CRR073302Leaf 34.375
CRR073303Juvenile bud 13.012
CRR073304Juvenile bud 26.873
CRR073305Juvenile bud 39.460
CRR073306Third green 12.303
CRR073307Third green 21.040
CRR073308Third green 31.014
CRR073309Second white 13.311
CRR073310Second white 21.795
CRR073311Second white 32.021
CRR073312Silver flowering 12.555
CRR073313Silver flowering 24.918
CRR073314Silver flowering 30.000
CRR073315Gold flowering 11.275
CRR073316Gold flowering 26.435
CRR073317Gold flowering 33.196
CRR073318Tawny withering 11.827
CRR073319Tawny withering 22.794
CRR073320Tawny withering 33.533