Detail information of GWHGAAZE003714


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrXP_010035308.17.8697E-101PREDICTED: small heat shock protein, chloroplastic-like [Eucalyptus grandis]
COGYP_001003754.13E-18heat shock protein Hsp20
Swissprottr|P30222|HS22C_PETHY8E-97Small heat shock protein, chloroplastic (Precursor)
trEMBLtr|A0A058ZXX4|A0A058ZXX4_EUCGR3E-101Uncharacterized protein {ECO:0000313|EMBL:KCW46613.1}
TAIR10AT4G27670.14E-68heat shock protein 21

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000001gene102738675102740328+
GWHAAZE00000001mRNA102738675102740328+
GWHAAZE00000001exon102738675102738966+
GWHAAZE00000001exon102739904102740328+
GWHAAZE00000001CDS102738675102738966+
GWHAAZE00000001CDS102739904102740328+
Transcript Sequence

Network for GWHGAAZE003714

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00011.22HSP201412382.90E-28
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K13993HSP20 Protein processing in endoplasmic reticulum map04141

Gene Ontology

GO term OntologyName

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf1.923
SRR3591706second leaf2.282
SRR3591707mature leaf0.143
SRR3591708Shoot apex3.078
SRR3591709Stem1.521
SRR3591710White floral bud0.189
SRR3591711White flower0.624
SRR3591712Green floral bud1.564
SRR3591713Yellow flower0.175
SRP173429 SRR8316895Juvenile bud stage 3.620
SRR8316896Juvenile bud stage 117.140
SRR8316897Juvenile bud stage 6.399
SRR8316894Third green stage 0.117
SRR8316900Third green stage 0.000
SRR8316901Third green stage 0.266
SRR8316898Complete white stage 0.000
SRR8316899Complete white stage 0.000
SRR8316903Complete white stage 0.000
SRR8316902Silver flowering stage0.219
SRR8316904Silver flowering stage0.195
SRR8316905Silver flowering stage0.201
SRR8316906Gold flowering stage 0.772
SRR8316907Gold flowering stage 1.167
SRR8316908Gold flowering stage 0.984
SRP132670SRR6706286Control0.126
SRR6706287Light intensity 50%0.030
SRR6706288Light intensity 20%0.075
CNP0000432CNS0095592Slightly white alabastrum(diploid) 10.425
CNS0095593Slightly white alabastrum(diploid) 20.194
CNS0095594Slightly white alabastrum(diploid) 31.112
CNS0095595Whole white alabastrum(diploid) 20.070
CNS0095596Whole white alabastrum(diploid) 30.504
CNS0095597Whole white alabastrum(diploid) 40.088
CNS0095598Silvery flower (diploied) 11.813
CNS0095599Silvery flower (diploied) 294.566
CNS0095600Silvery flower (diploied) 330.942
CNS0095601Golden flower (diploid) 1347.661
CNS0095602Golden flower (diploid) 226.054
CNS0095603Golden flower (diploid) 325.759
CNS0095604Slightly white alabastrum(tetraploid) 11.126
CNS0095605Slightly white alabastrum(tetraploid) 20.777
CNS0095606Slightly white alabastrum(tetraploid) 31.649
CNS0095607Whole white alabastrum(tetraploid) 10.315
CNS0095608Whole white alabastrum(tetraploid) 20.186
CNS0095609Whole white alabastrum(tetraploid) 32.560
CNS0095610Silvery flower (tetraploid) 120.335
CNS0095611Silvery flower (tetraploid) 254.838
CNS0095612Silvery flower (tetraploid) 326.259
CNS0095613Golden flower (tetraploid) 125.800
CNS0095614Golden flower (tetraploid) 218.974
CNS0095615Golden flower (tetraploid) 312.831
CRA001975CRR073297Stem 10.213
CRR073298Stem 20.110
CRR073299Stem 30.348
CRR073300Leaf 10.000
CRR073301Leaf 20.199
CRR073302Leaf 30.688
CRR073303Juvenile bud 10.171
CRR073304Juvenile bud 20.000
CRR073305Juvenile bud 30.000
CRR073306Third green 10.000
CRR073307Third green 20.000
CRR073308Third green 30.000
CRR073309Second white 10.142
CRR073310Second white 20.795
CRR073311Second white 30.185
CRR073312Silver flowering 10.450
CRR073313Silver flowering 20.599
CRR073314Silver flowering 30.000
CRR073315Gold flowering 12.440
CRR073316Gold flowering 26.602
CRR073317Gold flowering 36.187
CRR073318Tawny withering 10.753
CRR073319Tawny withering 20.970
CRR073320Tawny withering 33.389