Detail information of GWHGAAZE003599


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrCDP05129.11.38453E-98unnamed protein product [Coffea canephora]
Swissprottr|Q9FLX7|NDUA5_ARATH2E-86Probable NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 5, mitochondrial (Precursor)
trEMBLtr|A0A068UAA7|A0A068UAA7_COFCA5E-99Coffea canephora DH200=94 genomic scaffold, scaffold_15 {ECO:0000313|EMBL:CDP05129.1}
TAIR10AT5G52840.11E-68NADH-ubiquinone oxidoreductase-related

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000001gene100728109100731830+
GWHAAZE00000001mRNA100728109100731830+
GWHAAZE00000001exon100728109100728427+
GWHAAZE00000001exon100731607100731830+
GWHAAZE00000001CDS100728109100728427+
GWHAAZE00000001CDS100731607100731830+
Transcript Sequence

Network for GWHGAAZE003599

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF04716.15ETC_C1_NDUFA524902.80E-25
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K03949NDUFA5 Metabolic pathways map01100
Oxidative phosphorylationmap00190
Retrograde endocannabinoid signalingmap04723
Thermogenesismap04714

Gene Ontology

GO term OntologyName
GO:0022904biological_processrespiratory electron transport chain
GO:0005747cellular_componentmitochondrial respiratory chain complex I

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf192.328
SRR3591706second leaf64.232
SRR3591707mature leaf48.029
SRR3591708Shoot apex150.143
SRR3591709Stem130.622
SRR3591710White floral bud112.326
SRR3591711White flower122.215
SRR3591712Green floral bud138.941
SRR3591713Yellow flower118.581
SRP173429 SRR8316895Juvenile bud stage 152.264
SRR8316896Juvenile bud stage 224.338
SRR8316897Juvenile bud stage 53.547
SRR8316894Third green stage 74.075
SRR8316900Third green stage 312.760
SRR8316901Third green stage 322.839
SRR8316898Complete white stage 113.968
SRR8316899Complete white stage 285.769
SRR8316903Complete white stage 133.689
SRR8316902Silver flowering stage121.898
SRR8316904Silver flowering stage114.692
SRR8316905Silver flowering stage72.636
SRR8316906Gold flowering stage 241.392
SRR8316907Gold flowering stage 295.363
SRR8316908Gold flowering stage 181.446
SRP132670SRR6706286Control316.560
SRR6706287Light intensity 50%301.243
SRR6706288Light intensity 20%322.138
CNP0000432CNS0095592Slightly white alabastrum(diploid) 1307.009
CNS0095593Slightly white alabastrum(diploid) 2322.654
CNS0095594Slightly white alabastrum(diploid) 3299.877
CNS0095595Whole white alabastrum(diploid) 2309.678
CNS0095596Whole white alabastrum(diploid) 3360.084
CNS0095597Whole white alabastrum(diploid) 4287.318
CNS0095598Silvery flower (diploied) 1215.415
CNS0095599Silvery flower (diploied) 2241.729
CNS0095600Silvery flower (diploied) 3251.440
CNS0095601Golden flower (diploid) 1240.805
CNS0095602Golden flower (diploid) 2223.292
CNS0095603Golden flower (diploid) 3221.845
CNS0095604Slightly white alabastrum(tetraploid) 1362.756
CNS0095605Slightly white alabastrum(tetraploid) 2356.195
CNS0095606Slightly white alabastrum(tetraploid) 3312.933
CNS0095607Whole white alabastrum(tetraploid) 1329.417
CNS0095608Whole white alabastrum(tetraploid) 2355.937
CNS0095609Whole white alabastrum(tetraploid) 3388.496
CNS0095610Silvery flower (tetraploid) 1359.093
CNS0095611Silvery flower (tetraploid) 2271.783
CNS0095612Silvery flower (tetraploid) 3281.379
CNS0095613Golden flower (tetraploid) 1264.701
CNS0095614Golden flower (tetraploid) 2322.474
CNS0095615Golden flower (tetraploid) 3229.144
CRA001975CRR073297Stem 1221.863
CRR073298Stem 2217.360
CRR073299Stem 3277.365
CRR073300Leaf 1248.266
CRR073301Leaf 2270.769
CRR073302Leaf 3318.058
CRR073303Juvenile bud 1339.041
CRR073304Juvenile bud 2370.669
CRR073305Juvenile bud 3281.731
CRR073306Third green 1282.691
CRR073307Third green 2299.181
CRR073308Third green 3229.794
CRR073309Second white 1291.722
CRR073310Second white 2144.117
CRR073311Second white 3108.551
CRR073312Silver flowering 1146.973
CRR073313Silver flowering 2197.376
CRR073314Silver flowering 3127.065
CRR073315Gold flowering 194.607
CRR073316Gold flowering 294.818
CRR073317Gold flowering 388.052
CRR073318Tawny withering 1179.739
CRR073319Tawny withering 2181.539
CRR073320Tawny withering 3166.386