Detail information of GWHGAAZE003502


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrAFQ59977.11.58913E-96CRT/DRE binding factor 1 [Morus alba var. multicaulis]
Swissprottr|Q9SYS6|DRE1C_ARATH6E-76Dehydration-responsive element-binding protein 1C
trEMBLtr|J7K128|J7K128_MORAL6E-97CRT/DRE binding factor 1 {ECO:0000313|EMBL:AFQ59977.1}
TAIR10AT4G25470.15E-58C-repeat/DRE binding factor 2

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000001gene9913127799131957-
GWHAAZE00000001mRNA9913127799131957-
GWHAAZE00000001exon9913127799131957-
GWHAAZE00000001CDS9913127799131957-
Transcript Sequence

Network for GWHGAAZE003502

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00847.21AP2621128.10E-15
Protein Sequence

Gene family

Gene familysubfamily
Transcription Factors FamilyAP2/ERF-ERF

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0006355biological_processregulation of transcription, DNA-templated
GO:0003677molecular_functionDNA binding
GO:0003700molecular_functionDNA-binding transcription factor activity

Expression pattern

Created with Highcharts 5.0.4Chart context menuExpression pattern for GWHGAAZE003502.youngest leafsecond leafmature leafShoot apexStemWhite floral budWhite flowerGreen floral budYellow flowerJuvenile bud stage 1Juvenile bud stage 2Juvenile bud stage 3Third green stage 1Third green stage 2Third green stage 3Complete white stage 1Complete white stage 2Complete white stage 3Silver flowering stage 1Silver flowering stage 2Silver flowering stage 3Gold flowering stage 1Gold flowering stage 2Gold flowering stage 3Control 1Light intensity 50%Light intensity 20%Slightly white alabastrum(diploid) 1Slightly white alabastrum(diploid) 2Slightly white alabastrum(diploid) 3Whole white alabastrum(diploid) 1Whole white alabastrum(diploid) 2Whole white alabastrum(diploid) 3Silvery flower (diploied) 1Silvery flower (diploied) 2Silvery flower (diploied) 3Golden flower (diploid) 1Golden flower (diploid) 2Golden flower (diploid) 3Slightly white alabastrum(tetraploid) 1Slightly white alabastrum(tetraploid) 2Slightly white alabastrum(tetraploid) 3Whole white alabastrum(tetraploid) 1Whole white alabastrum(tetraploid) 2Whole white alabastrum(tetraploid) 3Silvery flower (tetraploid) 1Silvery flower (tetraploid) 2Silvery flower (tetraploid) 3Golden flower (tetraploid) 1Golden flower (tetraploid) 2Golden flower (tetraploid) 3Stem 1Stem 2Stem 3Leaf 1Leaf 2Leaf 3Juvenile bud 1Juvenile bud 2Juvenile bud 3Third green 1Third green 2Third green 3Second white 1Second white 2Second white 3Silver flowering 1Silver flowering 2Silver flowering 3Gold flowering 1Gold flowering 2Gold flowering 3Tawny withering 1Tawny withering 2Tawny withering 300.511.522.533.544.555.5Highcharts.com

Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf0.348
SRR3591706second leaf0.000
SRR3591707mature leaf0.000
SRR3591708Shoot apex0.148
SRR3591709Stem0.493
SRR3591710White floral bud0.301
SRR3591711White flower0.542
SRR3591712Green floral bud2.785
SRR3591713Yellow flower0.235
SRP173429 SRR8316895Juvenile bud stage 1.191
SRR8316896Juvenile bud stage 2.535
SRR8316897Juvenile bud stage 0.823
SRR8316894Third green stage 0.174
SRR8316900Third green stage 0.219
SRR8316901Third green stage 0.763
SRR8316898Complete white stage 0.000
SRR8316899Complete white stage 0.417
SRR8316903Complete white stage 0.000
SRR8316902Silver flowering stage0.000
SRR8316904Silver flowering stage0.000
SRR8316905Silver flowering stage0.000
SRR8316906Gold flowering stage 0.000
SRR8316907Gold flowering stage 0.000
SRR8316908Gold flowering stage 0.000
SRP132670SRR6706286Control0.000
SRR6706287Light intensity 50%0.000
SRR6706288Light intensity 20%0.082
CNP0000432CNS0095592Slightly white alabastrum(diploid) 12.019
CNS0095593Slightly white alabastrum(diploid) 22.108
CNS0095594Slightly white alabastrum(diploid) 34.807
CNS0095595Whole white alabastrum(diploid) 23.585
CNS0095596Whole white alabastrum(diploid) 30.496
CNS0095597Whole white alabastrum(diploid) 42.342
CNS0095598Silvery flower (diploied) 11.598
CNS0095599Silvery flower (diploied) 23.239
CNS0095600Silvery flower (diploied) 30.929
CNS0095601Golden flower (diploid) 11.273
CNS0095602Golden flower (diploid) 21.283
CNS0095603Golden flower (diploid) 30.886
CNS0095604Slightly white alabastrum(tetraploid) 10.000
CNS0095605Slightly white alabastrum(tetraploid) 20.000
CNS0095606Slightly white alabastrum(tetraploid) 30.000
CNS0095607Whole white alabastrum(tetraploid) 10.000
CNS0095608Whole white alabastrum(tetraploid) 20.000
CNS0095609Whole white alabastrum(tetraploid) 30.000
CNS0095610Silvery flower (tetraploid) 10.095
CNS0095611Silvery flower (tetraploid) 20.015
CNS0095612Silvery flower (tetraploid) 30.195
CNS0095613Golden flower (tetraploid) 10.000
CNS0095614Golden flower (tetraploid) 20.085
CNS0095615Golden flower (tetraploid) 30.000
CRA001975CRR073297Stem 10.000
CRR073298Stem 20.328
CRR073299Stem 30.044
CRR073300Leaf 10.338
CRR073301Leaf 21.416
CRR073302Leaf 30.560
CRR073303Juvenile bud 10.000
CRR073304Juvenile bud 20.399
CRR073305Juvenile bud 30.524
CRR073306Third green 10.154
CRR073307Third green 20.080
CRR073308Third green 30.115
CRR073309Second white 10.000
CRR073310Second white 20.000
CRR073311Second white 30.000
CRR073312Silver flowering 10.542
CRR073313Silver flowering 20.084
CRR073314Silver flowering 30.211
CRR073315Gold flowering 10.012
CRR073316Gold flowering 20.831
CRR073317Gold flowering 30.129
CRR073318Tawny withering 10.058
CRR073319Tawny withering 23.351
CRR073320Tawny withering 30.000