Detail information of GWHGAAZE003333


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrCDP13968.12.55534E-97unnamed protein product [Coffea canephora]
Swissprottr|O80920|PYL4_ARATH2E-79Abscisic acid receptor PYL4
trEMBLtr|A0A068V239|A0A068V239_COFCA1E-97Coffea canephora DH200=94 genomic scaffold, scaffold_78 {ECO:0000313|EMBL:CDP13968.1}
TAIR10AT2G38310.19E-63PYR1-like 4

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000001gene9615416096154705-
GWHAAZE00000001mRNA9615416096154705-
GWHAAZE00000001exon9615416096154705-
GWHAAZE00000001CDS9615416096154705-
Transcript Sequence

Network for GWHGAAZE003333

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF10604.10Polyketide_cyc2281701.80E-15
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K14496PYL MAPK signaling pathway - plant map04016
Plant hormone signal transductionmap04075

Gene Ontology

GO term OntologyName

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf2.464
SRR3591706second leaf1.599
SRR3591707mature leaf3.101
SRR3591708Shoot apex5.026
SRR3591709Stem5.005
SRR3591710White floral bud3.295
SRR3591711White flower1.544
SRR3591712Green floral bud2.960
SRR3591713Yellow flower4.037
SRP173429 SRR8316895Juvenile bud stage 1.396
SRR8316896Juvenile bud stage 1.921
SRR8316897Juvenile bud stage 0.577
SRR8316894Third green stage 0.613
SRR8316900Third green stage 2.565
SRR8316901Third green stage 3.563
SRR8316898Complete white stage 0.383
SRR8316899Complete white stage 5.595
SRR8316903Complete white stage 1.363
SRR8316902Silver flowering stage0.266
SRR8316904Silver flowering stage0.063
SRR8316905Silver flowering stage0.186
SRR8316906Gold flowering stage 0.818
SRR8316907Gold flowering stage 1.117
SRR8316908Gold flowering stage 0.541
SRP132670SRR6706286Control5.311
SRR6706287Light intensity 50%5.665
SRR6706288Light intensity 20%4.891
CNP0000432CNS0095592Slightly white alabastrum(diploid) 12.316
CNS0095593Slightly white alabastrum(diploid) 26.661
CNS0095594Slightly white alabastrum(diploid) 33.172
CNS0095595Whole white alabastrum(diploid) 22.278
CNS0095596Whole white alabastrum(diploid) 31.996
CNS0095597Whole white alabastrum(diploid) 42.827
CNS0095598Silvery flower (diploied) 11.873
CNS0095599Silvery flower (diploied) 22.590
CNS0095600Silvery flower (diploied) 30.689
CNS0095601Golden flower (diploid) 13.198
CNS0095602Golden flower (diploid) 21.718
CNS0095603Golden flower (diploid) 31.055
CNS0095604Slightly white alabastrum(tetraploid) 12.397
CNS0095605Slightly white alabastrum(tetraploid) 20.827
CNS0095606Slightly white alabastrum(tetraploid) 32.061
CNS0095607Whole white alabastrum(tetraploid) 10.854
CNS0095608Whole white alabastrum(tetraploid) 20.401
CNS0095609Whole white alabastrum(tetraploid) 32.276
CNS0095610Silvery flower (tetraploid) 10.000
CNS0095611Silvery flower (tetraploid) 20.124
CNS0095612Silvery flower (tetraploid) 30.559
CNS0095613Golden flower (tetraploid) 12.905
CNS0095614Golden flower (tetraploid) 20.326
CNS0095615Golden flower (tetraploid) 35.335
CRA001975CRR073297Stem 18.258
CRR073298Stem 28.725
CRR073299Stem 311.408
CRR073300Leaf 16.053
CRR073301Leaf 26.491
CRR073302Leaf 37.026
CRR073303Juvenile bud 16.200
CRR073304Juvenile bud 26.654
CRR073305Juvenile bud 312.832
CRR073306Third green 14.974
CRR073307Third green 24.637
CRR073308Third green 34.558
CRR073309Second white 12.798
CRR073310Second white 20.830
CRR073311Second white 33.216
CRR073312Silver flowering 11.347
CRR073313Silver flowering 23.479
CRR073314Silver flowering 30.939
CRR073315Gold flowering 18.952
CRR073316Gold flowering 219.911
CRR073317Gold flowering 342.522
CRR073318Tawny withering 17.391
CRR073319Tawny withering 216.802
CRR073320Tawny withering 34.587