Detail information of GWHGAAZE003329


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrKDP44709.11.03266E-96hypothetical protein JCGZ_01209 [Jatropha curcas]
Swissprottr|Q8LBW3|LBD12_ARATH1E-73LOB domain-containing protein 12
trEMBLtr|A0A067LK93|A0A067LK93_JATCU4E-97Uncharacterized protein {ECO:0000313|EMBL:KDP44709.1}
TAIR10AT2G30130.11E-52Lateral organ boundaries (LOB) domain family protein

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000001gene9610205696102887+
GWHAAZE00000001mRNA9610205696102887+
GWHAAZE00000001exon9610205696102253+
GWHAAZE00000001exon9610253196102887+
GWHAAZE00000001CDS9610205696102253+
GWHAAZE00000001CDS9610253196102887+
Transcript Sequence

Network for GWHGAAZE003329

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF03195.15LOB201176.40E-42
Protein Sequence

Gene family

Gene familysubfamily
Transcription Factors FamilyLOB

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf0.208
SRR3591706second leaf0.000
SRR3591707mature leaf2.721
SRR3591708Shoot apex0.000
SRR3591709Stem0.000
SRR3591710White floral bud0.509
SRR3591711White flower0.128
SRR3591712Green floral bud1.592
SRR3591713Yellow flower0.162
SRP173429 SRR8316895Juvenile bud stage 0.264
SRR8316896Juvenile bud stage 0.098
SRR8316897Juvenile bud stage 0.000
SRR8316894Third green stage 0.730
SRR8316900Third green stage 2.464
SRR8316901Third green stage 3.492
SRR8316898Complete white stage 0.000
SRR8316899Complete white stage 2.771
SRR8316903Complete white stage 0.000
SRR8316902Silver flowering stage0.000
SRR8316904Silver flowering stage0.000
SRR8316905Silver flowering stage0.000
SRR8316906Gold flowering stage 0.000
SRR8316907Gold flowering stage 0.000
SRR8316908Gold flowering stage 0.000
SRP132670SRR6706286Control0.996
SRR6706287Light intensity 50%1.982
SRR6706288Light intensity 20%2.440
CNP0000432CNS0095592Slightly white alabastrum(diploid) 10.622
CNS0095593Slightly white alabastrum(diploid) 24.146
CNS0095594Slightly white alabastrum(diploid) 30.000
CNS0095595Whole white alabastrum(diploid) 22.913
CNS0095596Whole white alabastrum(diploid) 31.461
CNS0095597Whole white alabastrum(diploid) 42.995
CNS0095598Silvery flower (diploied) 10.000
CNS0095599Silvery flower (diploied) 20.285
CNS0095600Silvery flower (diploied) 30.197
CNS0095601Golden flower (diploid) 10.046
CNS0095602Golden flower (diploid) 20.373
CNS0095603Golden flower (diploid) 30.320
CNS0095604Slightly white alabastrum(tetraploid) 11.877
CNS0095605Slightly white alabastrum(tetraploid) 21.028
CNS0095606Slightly white alabastrum(tetraploid) 32.958
CNS0095607Whole white alabastrum(tetraploid) 13.080
CNS0095608Whole white alabastrum(tetraploid) 23.883
CNS0095609Whole white alabastrum(tetraploid) 32.212
CNS0095610Silvery flower (tetraploid) 10.098
CNS0095611Silvery flower (tetraploid) 20.185
CNS0095612Silvery flower (tetraploid) 30.346
CNS0095613Golden flower (tetraploid) 10.000
CNS0095614Golden flower (tetraploid) 20.000
CNS0095615Golden flower (tetraploid) 30.000
CRA001975CRR073297Stem 10.515
CRR073298Stem 20.317
CRR073299Stem 30.000
CRR073300Leaf 12.314
CRR073301Leaf 23.179
CRR073302Leaf 32.483
CRR073303Juvenile bud 10.806
CRR073304Juvenile bud 21.416
CRR073305Juvenile bud 35.673
CRR073306Third green 10.000
CRR073307Third green 20.000
CRR073308Third green 30.000
CRR073309Second white 10.000
CRR073310Second white 20.000
CRR073311Second white 30.000
CRR073312Silver flowering 10.000
CRR073313Silver flowering 20.000
CRR073314Silver flowering 30.000
CRR073315Gold flowering 10.000
CRR073316Gold flowering 20.000
CRR073317Gold flowering 30.000
CRR073318Tawny withering 10.000
CRR073319Tawny withering 20.000
CRR073320Tawny withering 30.000