Detail information of GWHGAAZE003320


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrXP_002273020.10PREDICTED: uncharacterized protein LOC100241552 isoform X4 [Vitis vinifera]
COGYP_004650998.18E-161hypothetical protein PUV_01940
trEMBLtr|D7T4L5|D7T4L5_VITVI0Putative uncharacterized protein {ECO:0000313|EMBL:CBI25447.3}
TAIR10AT3G56040.10UDP-glucose pyrophosphorylase 3

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000001gene9596200795976325-
GWHAAZE00000001mRNA9596200795976325-
GWHAAZE00000001exon9597598195976325-
GWHAAZE00000001exon9597472595975210-
GWHAAZE00000001exon9597223595972750-
GWHAAZE00000001exon9596842995968778-
GWHAAZE00000001exon9596784195968021-
GWHAAZE00000001exon9596761395967762-
GWHAAZE00000001exon9596728195967442-
GWHAAZE00000001exon9596699895967170-
GWHAAZE00000001exon9596681895966884-
GWHAAZE00000001exon9596586695966032-
GWHAAZE00000001exon9596438495964542-
GWHAAZE00000001exon9596415995964250-
GWHAAZE00000001exon9596398595964079-
GWHAAZE00000001exon9596373395963810-
GWHAAZE00000001exon9596334795963442-
GWHAAZE00000001exon9596297695963050-
GWHAAZE00000001exon9596280595962896-
GWHAAZE00000001exon9596255195962713-
GWHAAZE00000001exon9596233095962390-
GWHAAZE00000001exon9596200795962119-
GWHAAZE00000001CDS9597598195976325-
GWHAAZE00000001CDS9597472595975210-
GWHAAZE00000001CDS9597223595972750-
GWHAAZE00000001CDS9596842995968778-
GWHAAZE00000001CDS9596784195968021-
GWHAAZE00000001CDS9596761395967762-
GWHAAZE00000001CDS9596728195967442-
GWHAAZE00000001CDS9596699895967170-
GWHAAZE00000001CDS9596681895966884-
GWHAAZE00000001CDS9596586695966032-
GWHAAZE00000001CDS9596438495964542-
GWHAAZE00000001CDS9596415995964250-
GWHAAZE00000001CDS9596398595964079-
GWHAAZE00000001CDS9596373395963810-
GWHAAZE00000001CDS9596334795963442-
GWHAAZE00000001CDS9596297695963050-
GWHAAZE00000001CDS9596280595962896-
GWHAAZE00000001CDS9596255195962713-
GWHAAZE00000001CDS9596233095962390-
GWHAAZE00000001CDS9596200795962119-
Transcript Sequence

Network for GWHGAAZE003320

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF01103.24Omp851294503.10E-24
PF01704.19UDPGP6758000.00014
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K22920UGP3 Glycerolipid metabolism map00561

Gene Ontology

GO term OntologyName
GO:0019867cellular_componentouter membrane

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf18.709
SRR3591706second leaf48.643
SRR3591707mature leaf56.021
SRR3591708Shoot apex21.000
SRR3591709Stem18.341
SRR3591710White floral bud18.031
SRR3591711White flower22.290
SRR3591712Green floral bud17.955
SRR3591713Yellow flower25.269
SRP173429 SRR8316895Juvenile bud stage 14.238
SRR8316896Juvenile bud stage 18.190
SRR8316897Juvenile bud stage 7.846
SRR8316894Third green stage 8.021
SRR8316900Third green stage 20.729
SRR8316901Third green stage 18.417
SRR8316898Complete white stage 5.926
SRR8316899Complete white stage 19.922
SRR8316903Complete white stage 13.399
SRR8316902Silver flowering stage11.980
SRR8316904Silver flowering stage19.324
SRR8316905Silver flowering stage8.521
SRR8316906Gold flowering stage 23.861
SRR8316907Gold flowering stage 24.872
SRR8316908Gold flowering stage 22.846
SRP132670SRR6706286Control14.508
SRR6706287Light intensity 50%16.157
SRR6706288Light intensity 20%17.831
CNP0000432CNS0095592Slightly white alabastrum(diploid) 110.118
CNS0095593Slightly white alabastrum(diploid) 28.243
CNS0095594Slightly white alabastrum(diploid) 310.198
CNS0095595Whole white alabastrum(diploid) 28.501
CNS0095596Whole white alabastrum(diploid) 37.192
CNS0095597Whole white alabastrum(diploid) 47.756
CNS0095598Silvery flower (diploied) 111.900
CNS0095599Silvery flower (diploied) 212.148
CNS0095600Silvery flower (diploied) 317.481
CNS0095601Golden flower (diploid) 111.399
CNS0095602Golden flower (diploid) 219.766
CNS0095603Golden flower (diploid) 317.552
CNS0095604Slightly white alabastrum(tetraploid) 110.424
CNS0095605Slightly white alabastrum(tetraploid) 28.023
CNS0095606Slightly white alabastrum(tetraploid) 317.655
CNS0095607Whole white alabastrum(tetraploid) 16.841
CNS0095608Whole white alabastrum(tetraploid) 25.196
CNS0095609Whole white alabastrum(tetraploid) 314.123
CNS0095610Silvery flower (tetraploid) 115.915
CNS0095611Silvery flower (tetraploid) 215.950
CNS0095612Silvery flower (tetraploid) 39.168
CNS0095613Golden flower (tetraploid) 18.763
CNS0095614Golden flower (tetraploid) 216.904
CNS0095615Golden flower (tetraploid) 315.833
CRA001975CRR073297Stem 121.105
CRR073298Stem 217.210
CRR073299Stem 319.495
CRR073300Leaf 119.134
CRR073301Leaf 217.193
CRR073302Leaf 317.749
CRR073303Juvenile bud 115.946
CRR073304Juvenile bud 213.614
CRR073305Juvenile bud 318.747
CRR073306Third green 16.204
CRR073307Third green 24.376
CRR073308Third green 35.797
CRR073309Second white 15.035
CRR073310Second white 27.979
CRR073311Second white 39.357
CRR073312Silver flowering 19.380
CRR073313Silver flowering 26.467
CRR073314Silver flowering 38.425
CRR073315Gold flowering 113.975
CRR073316Gold flowering 224.945
CRR073317Gold flowering 312.608
CRR073318Tawny withering 111.717
CRR073319Tawny withering 28.288
CRR073320Tawny withering 311.627