Detail information of GWHGAAZE003275


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrXP_008381989.12.6052E-163PREDICTED: peroxisomal nicotinamide adenine dinucleotide carrier-like isoform X1 [Malus domestica]
Swissprottr|O04200|PXN_ARATH1E-141Peroxisomal nicotinamide adenine dinucleotide carrier
trEMBLtr|A0A068V2D7|A0A068V2D7_COFCA6E-160Coffea canephora DH200=94 genomic scaffold, scaffold_78 {ECO:0000313|EMBL:CDP14058.1}
TAIR10AT2G39970.14E-105Mitochondrial substrate carrier family protein

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000001gene9508274695088961-
GWHAAZE00000001mRNA9508274695088961-
GWHAAZE00000001exon9508274695082939-
GWHAAZE00000001exon9508317395083227-
GWHAAZE00000001exon9508380695083874-
GWHAAZE00000001exon9508418095084311-
GWHAAZE00000001exon9508439195084459-
GWHAAZE00000001exon9508583795085938-
GWHAAZE00000001exon9508614095086194-
GWHAAZE00000001exon9508676395086893-
GWHAAZE00000001exon9508854095088614-
GWHAAZE00000001exon9508888195088961-
GWHAAZE00000001CDS9508888195088961-
GWHAAZE00000001CDS9508854095088614-
GWHAAZE00000001CDS9508676395086893-
GWHAAZE00000001CDS9508614095086194-
GWHAAZE00000001CDS9508583795085938-
GWHAAZE00000001CDS9508439195084459-
GWHAAZE00000001CDS9508418095084311-
GWHAAZE00000001CDS9508380695083874-
GWHAAZE00000001CDS9508317395083227-
GWHAAZE00000001CDS9508274695082939-
Transcript Sequence

Network for GWHGAAZE003275

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00153.28Mito_carr831915.60E-20
PF00153.28Mito_carr2132991.90E-17
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K13354SLC25A17, PMP34 Peroxisome map04146

Gene Ontology

GO term OntologyName

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf68.151
SRR3591706second leaf40.035
SRR3591707mature leaf16.909
SRR3591708Shoot apex53.109
SRR3591709Stem57.455
SRR3591710White floral bud62.997
SRR3591711White flower73.242
SRR3591712Green floral bud69.155
SRR3591713Yellow flower72.734
SRP173429 SRR8316895Juvenile bud stage 95.758
SRR8316896Juvenile bud stage 126.421
SRR8316897Juvenile bud stage 93.633
SRR8316894Third green stage 24.933
SRR8316900Third green stage 76.232
SRR8316901Third green stage 88.618
SRR8316898Complete white stage 42.696
SRR8316899Complete white stage 122.236
SRR8316903Complete white stage 57.033
SRR8316902Silver flowering stage43.404
SRR8316904Silver flowering stage45.328
SRR8316905Silver flowering stage20.901
SRR8316906Gold flowering stage 88.365
SRR8316907Gold flowering stage 84.309
SRR8316908Gold flowering stage 80.526
SRP132670SRR6706286Control49.764
SRR6706287Light intensity 50%61.696
SRR6706288Light intensity 20%64.296
CNP0000432CNS0095592Slightly white alabastrum(diploid) 174.167
CNS0095593Slightly white alabastrum(diploid) 295.855
CNS0095594Slightly white alabastrum(diploid) 3101.395
CNS0095595Whole white alabastrum(diploid) 288.085
CNS0095596Whole white alabastrum(diploid) 340.395
CNS0095597Whole white alabastrum(diploid) 448.967
CNS0095598Silvery flower (diploied) 169.450
CNS0095599Silvery flower (diploied) 292.484
CNS0095600Silvery flower (diploied) 374.832
CNS0095601Golden flower (diploid) 187.647
CNS0095602Golden flower (diploid) 276.500
CNS0095603Golden flower (diploid) 374.252
CNS0095604Slightly white alabastrum(tetraploid) 145.664
CNS0095605Slightly white alabastrum(tetraploid) 236.981
CNS0095606Slightly white alabastrum(tetraploid) 344.454
CNS0095607Whole white alabastrum(tetraploid) 131.068
CNS0095608Whole white alabastrum(tetraploid) 225.506
CNS0095609Whole white alabastrum(tetraploid) 352.718
CNS0095610Silvery flower (tetraploid) 148.758
CNS0095611Silvery flower (tetraploid) 247.294
CNS0095612Silvery flower (tetraploid) 371.999
CNS0095613Golden flower (tetraploid) 142.597
CNS0095614Golden flower (tetraploid) 246.256
CNS0095615Golden flower (tetraploid) 346.134
CRA001975CRR073297Stem 169.150
CRR073298Stem 263.483
CRR073299Stem 357.735
CRR073300Leaf 178.866
CRR073301Leaf 268.002
CRR073302Leaf 363.221
CRR073303Juvenile bud 165.708
CRR073304Juvenile bud 260.146
CRR073305Juvenile bud 360.600
CRR073306Third green 152.682
CRR073307Third green 244.451
CRR073308Third green 347.420
CRR073309Second white 175.948
CRR073310Second white 283.947
CRR073311Second white 370.090
CRR073312Silver flowering 171.055
CRR073313Silver flowering 271.159
CRR073314Silver flowering 356.189
CRR073315Gold flowering 127.325
CRR073316Gold flowering 231.328
CRR073317Gold flowering 325.234
CRR073318Tawny withering 171.471
CRR073319Tawny withering 281.213
CRR073320Tawny withering 373.397