Detail information of GWHGAAZE003252


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrEYU35310.11.0618E-88hypothetical protein MIMGU_mgv1a015592mg [Erythranthe guttata]
COGYP_005887446.13E-24heat shock protein Hsp20
Swissprottr|P27880|HSP12_MEDSA4E-8618.2 kDa class I heat shock protein
trEMBLtr|A0A022R8V2|A0A022R8V2_ERYGU4E-89Uncharacterized protein {ECO:0000313|EMBL:EYU35310.1}
TAIR10AT5G59720.16E-52heat shock protein 18.2

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000001gene9478403194784513-
GWHAAZE00000001mRNA9478403194784513-
GWHAAZE00000001exon9478440694784513-
GWHAAZE00000001exon9478403194784375-
GWHAAZE00000001CDS9478440694784513-
GWHAAZE00000001CDS9478403194784375-
Transcript Sequence

Network for GWHGAAZE003252

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00011.22HSP20461493.30E-31
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K13993HSP20 Protein processing in endoplasmic reticulum map04141

Gene Ontology

GO term OntologyName

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf13.224
SRR3591706second leaf3.786
SRR3591707mature leaf3.911
SRR3591708Shoot apex3.653
SRR3591709Stem4.036
SRR3591710White floral bud0.618
SRR3591711White flower2.284
SRR3591712Green floral bud3.123
SRR3591713Yellow flower0.640
SRP173429 SRR8316895Juvenile bud stage 10.693
SRR8316896Juvenile bud stage 209.593
SRR8316897Juvenile bud stage 15.669
SRR8316894Third green stage 1.237
SRR8316900Third green stage 3.548
SRR8316901Third green stage 4.136
SRR8316898Complete white stage 0.507
SRR8316899Complete white stage 0.571
SRR8316903Complete white stage 0.504
SRR8316902Silver flowering stage0.524
SRR8316904Silver flowering stage0.240
SRR8316905Silver flowering stage0.366
SRR8316906Gold flowering stage 0.178
SRR8316907Gold flowering stage 0.709
SRR8316908Gold flowering stage 0.472
SRP132670SRR6706286Control5.176
SRR6706287Light intensity 50%3.680
SRR6706288Light intensity 20%3.899
CNP0000432CNS0095592Slightly white alabastrum(diploid) 16.351
CNS0095593Slightly white alabastrum(diploid) 27.143
CNS0095594Slightly white alabastrum(diploid) 33.643
CNS0095595Whole white alabastrum(diploid) 22.157
CNS0095596Whole white alabastrum(diploid) 35.801
CNS0095597Whole white alabastrum(diploid) 43.762
CNS0095598Silvery flower (diploied) 12.280
CNS0095599Silvery flower (diploied) 286.101
CNS0095600Silvery flower (diploied) 317.317
CNS0095601Golden flower (diploid) 1405.536
CNS0095602Golden flower (diploid) 213.025
CNS0095603Golden flower (diploid) 314.040
CNS0095604Slightly white alabastrum(tetraploid) 12.240
CNS0095605Slightly white alabastrum(tetraploid) 21.888
CNS0095606Slightly white alabastrum(tetraploid) 32.664
CNS0095607Whole white alabastrum(tetraploid) 10.798
CNS0095608Whole white alabastrum(tetraploid) 20.876
CNS0095609Whole white alabastrum(tetraploid) 33.423
CNS0095610Silvery flower (tetraploid) 10.443
CNS0095611Silvery flower (tetraploid) 20.000
CNS0095612Silvery flower (tetraploid) 30.127
CNS0095613Golden flower (tetraploid) 12.240
CNS0095614Golden flower (tetraploid) 20.449
CNS0095615Golden flower (tetraploid) 30.206
CRA001975CRR073297Stem 13.223
CRR073298Stem 22.282
CRR073299Stem 32.906
CRR073300Leaf 15.276
CRR073301Leaf 23.461
CRR073302Leaf 33.963
CRR073303Juvenile bud 11.673
CRR073304Juvenile bud 21.495
CRR073305Juvenile bud 31.628
CRR073306Third green 11.354
CRR073307Third green 20.958
CRR073308Third green 31.027
CRR073309Second white 10.000
CRR073310Second white 20.000
CRR073311Second white 30.000
CRR073312Silver flowering 10.000
CRR073313Silver flowering 20.018
CRR073314Silver flowering 30.116
CRR073315Gold flowering 13.574
CRR073316Gold flowering 22.482
CRR073317Gold flowering 31.612
CRR073318Tawny withering 12.818
CRR073319Tawny withering 23.429
CRR073320Tawny withering 34.532