Detail information of GWHGAAZE003246


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrXP_011036031.11.03463E-87PREDICTED: 18.1 kDa class I heat shock protein-like [Populus euphratica]
COGYP_007976722.14E-24Small heat shock protein
Swissprottr|P02519|HSP11_SOYBN2E-8417.3 kDa class I heat shock protein
trEMBLtr|A0A022R8V2|A0A022R8V2_ERYGU2E-84Uncharacterized protein {ECO:0000313|EMBL:EYU35310.1}
TAIR10AT3G46230.13E-56heat shock protein 17.4

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000001gene9470023894700717-
GWHAAZE00000001mRNA9470023894700717-
GWHAAZE00000001exon9470062294700717-
GWHAAZE00000001exon9470023894700591-
GWHAAZE00000001CDS9470062294700717-
GWHAAZE00000001CDS9470023894700591-
Transcript Sequence

Network for GWHGAAZE003246

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00011.22HSP20451484.10E-32
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K13993HSP20 Protein processing in endoplasmic reticulum map04141

Gene Ontology

GO term OntologyName

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf0.105
SRR3591706second leaf0.000
SRR3591707mature leaf0.000
SRR3591708Shoot apex0.274
SRR3591709Stem0.000
SRR3591710White floral bud1.054
SRR3591711White flower0.223
SRR3591712Green floral bud2.288
SRR3591713Yellow flower25.680
SRP173429 SRR8316895Juvenile bud stage 0.515
SRR8316896Juvenile bud stage 17.985
SRR8316897Juvenile bud stage 0.922
SRR8316894Third green stage 3.169
SRR8316900Third green stage 30.697
SRR8316901Third green stage 35.839
SRR8316898Complete white stage 0.102
SRR8316899Complete white stage 0.119
SRR8316903Complete white stage 0.177
SRR8316902Silver flowering stage4.732
SRR8316904Silver flowering stage3.712
SRR8316905Silver flowering stage4.526
SRR8316906Gold flowering stage 10.816
SRR8316907Gold flowering stage 7.205
SRR8316908Gold flowering stage 3.273
SRP132670SRR6706286Control13.088
SRR6706287Light intensity 50%13.203
SRR6706288Light intensity 20%13.680
CNP0000432CNS0095592Slightly white alabastrum(diploid) 18.966
CNS0095593Slightly white alabastrum(diploid) 211.479
CNS0095594Slightly white alabastrum(diploid) 39.683
CNS0095595Whole white alabastrum(diploid) 235.326
CNS0095596Whole white alabastrum(diploid) 342.184
CNS0095597Whole white alabastrum(diploid) 448.311
CNS0095598Silvery flower (diploied) 12.881
CNS0095599Silvery flower (diploied) 214.756
CNS0095600Silvery flower (diploied) 310.598
CNS0095601Golden flower (diploid) 134.220
CNS0095602Golden flower (diploid) 26.782
CNS0095603Golden flower (diploid) 37.878
CNS0095604Slightly white alabastrum(tetraploid) 110.944
CNS0095605Slightly white alabastrum(tetraploid) 29.094
CNS0095606Slightly white alabastrum(tetraploid) 31.114
CNS0095607Whole white alabastrum(tetraploid) 119.680
CNS0095608Whole white alabastrum(tetraploid) 216.283
CNS0095609Whole white alabastrum(tetraploid) 38.814
CNS0095610Silvery flower (tetraploid) 1136.675
CNS0095611Silvery flower (tetraploid) 2161.527
CNS0095612Silvery flower (tetraploid) 3217.946
CNS0095613Golden flower (tetraploid) 1742.959
CNS0095614Golden flower (tetraploid) 2193.696
CNS0095615Golden flower (tetraploid) 3564.514
CRA001975CRR073297Stem 11.732
CRR073298Stem 21.489
CRR073299Stem 30.180
CRR073300Leaf 17.859
CRR073301Leaf 25.851
CRR073302Leaf 34.777
CRR073303Juvenile bud 16.737
CRR073304Juvenile bud 25.073
CRR073305Juvenile bud 30.334
CRR073306Third green 114.051
CRR073307Third green 28.131
CRR073308Third green 315.885
CRR073309Second white 11.426
CRR073310Second white 23.698
CRR073311Second white 35.003
CRR073312Silver flowering 15.991
CRR073313Silver flowering 21.711
CRR073314Silver flowering 32.585
CRR073315Gold flowering 12.257
CRR073316Gold flowering 20.993
CRR073317Gold flowering 31.085
CRR073318Tawny withering 11.556
CRR073319Tawny withering 20.371
CRR073320Tawny withering 31.745