Detail information of GWHGAAZE003237


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrXP_011036031.17.22351E-89PREDICTED: 18.1 kDa class I heat shock protein-like [Populus euphratica]
COGYP_005887446.15E-25heat shock protein Hsp20
Swissprottr|P02519|HSP11_SOYBN5E-8517.3 kDa class I heat shock protein
trEMBLtr|A0A022R8V2|A0A022R8V2_ERYGU1E-85Uncharacterized protein {ECO:0000313|EMBL:EYU35310.1}
TAIR10AT3G46230.19E-57heat shock protein 17.4

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000001gene9454967094550149-
GWHAAZE00000001mRNA9454967094550149-
GWHAAZE00000001exon9455005494550149-
GWHAAZE00000001exon9454967094550023-
GWHAAZE00000001CDS9455005494550149-
GWHAAZE00000001CDS9454967094550023-
Transcript Sequence

Network for GWHGAAZE003237

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00011.22HSP20451483.80E-32
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K13993HSP20 Protein processing in endoplasmic reticulum map04141

Gene Ontology

GO term OntologyName

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf0.277
SRR3591706second leaf0.000
SRR3591707mature leaf0.000
SRR3591708Shoot apex0.290
SRR3591709Stem0.000
SRR3591710White floral bud1.396
SRR3591711White flower0.000
SRR3591712Green floral bud3.355
SRR3591713Yellow flower45.150
SRP173429 SRR8316895Juvenile bud stage 1.697
SRR8316896Juvenile bud stage 26.172
SRR8316897Juvenile bud stage 7.817
SRR8316894Third green stage 2.556
SRR8316900Third green stage 18.708
SRR8316901Third green stage 21.447
SRR8316898Complete white stage 0.000
SRR8316899Complete white stage 0.701
SRR8316903Complete white stage 0.000
SRR8316902Silver flowering stage1.131
SRR8316904Silver flowering stage1.173
SRR8316905Silver flowering stage0.380
SRR8316906Gold flowering stage 3.569
SRR8316907Gold flowering stage 0.878
SRR8316908Gold flowering stage 1.559
SRP132670SRR6706286Control11.656
SRR6706287Light intensity 50%9.881
SRR6706288Light intensity 20%10.581
CNP0000432CNS0095592Slightly white alabastrum(diploid) 113.735
CNS0095593Slightly white alabastrum(diploid) 27.608
CNS0095594Slightly white alabastrum(diploid) 39.874
CNS0095595Whole white alabastrum(diploid) 225.307
CNS0095596Whole white alabastrum(diploid) 328.494
CNS0095597Whole white alabastrum(diploid) 431.185
CNS0095598Silvery flower (diploied) 10.845
CNS0095599Silvery flower (diploied) 213.259
CNS0095600Silvery flower (diploied) 310.332
CNS0095601Golden flower (diploid) 154.287
CNS0095602Golden flower (diploid) 210.939
CNS0095603Golden flower (diploid) 311.313
CNS0095604Slightly white alabastrum(tetraploid) 14.085
CNS0095605Slightly white alabastrum(tetraploid) 22.689
CNS0095606Slightly white alabastrum(tetraploid) 30.372
CNS0095607Whole white alabastrum(tetraploid) 15.547
CNS0095608Whole white alabastrum(tetraploid) 25.168
CNS0095609Whole white alabastrum(tetraploid) 33.616
CNS0095610Silvery flower (tetraploid) 130.824
CNS0095611Silvery flower (tetraploid) 224.085
CNS0095612Silvery flower (tetraploid) 338.356
CNS0095613Golden flower (tetraploid) 1181.613
CNS0095614Golden flower (tetraploid) 243.316
CNS0095615Golden flower (tetraploid) 397.768
CRA001975CRR073297Stem 10.405
CRR073298Stem 21.453
CRR073299Stem 30.282
CRR073300Leaf 17.963
CRR073301Leaf 25.701
CRR073302Leaf 33.585
CRR073303Juvenile bud 14.840
CRR073304Juvenile bud 23.326
CRR073305Juvenile bud 30.529
CRR073306Third green 12.948
CRR073307Third green 21.167
CRR073308Third green 32.472
CRR073309Second white 10.683
CRR073310Second white 20.878
CRR073311Second white 31.006
CRR073312Silver flowering 15.126
CRR073313Silver flowering 23.396
CRR073314Silver flowering 33.563
CRR073315Gold flowering 11.255
CRR073316Gold flowering 20.152
CRR073317Gold flowering 30.954
CRR073318Tawny withering 10.811
CRR073319Tawny withering 20.995
CRR073320Tawny withering 31.097