Detail information of GWHGAAZE003074


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrXP_007220907.10hypothetical protein PRUPE_ppa001080mg [Prunus persica]
COGYP_007146306.13E-157aminodeoxychorismate synthase, component I
Swissprottr|Q6TAS3|ADCS_SOLLC0Aminodeoxychorismate synthase, chloroplastic (Precursor)
trEMBLtr|M5X9F5|M5X9F5_PRUPE0Uncharacterized protein {ECO:0000313|EMBL:EMJ22106.1}
TAIR10AT2G28880.10para-aminobenzoate (PABA) synthase family protein

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000001gene9149566191509302-
GWHAAZE00000001mRNA9149566191509302-
GWHAAZE00000001exon9150897291509302-
GWHAAZE00000001exon9150770991507975-
GWHAAZE00000001exon9150663091506761-
GWHAAZE00000001exon9150626891506335-
GWHAAZE00000001exon9150541091505474-
GWHAAZE00000001exon9150514891505214-
GWHAAZE00000001exon9150365491503941-
GWHAAZE00000001exon9150344191503554-
GWHAAZE00000001exon9150316191503190-
GWHAAZE00000001exon9150281491503051-
GWHAAZE00000001exon9150265391502686-
GWHAAZE00000001exon9150182791501929-
GWHAAZE00000001exon9149894691499028-
GWHAAZE00000001exon9149688791497507-
GWHAAZE00000001exon9149566191496153-
GWHAAZE00000001CDS9150897291509302-
GWHAAZE00000001CDS9150770991507975-
GWHAAZE00000001CDS9150663091506761-
GWHAAZE00000001CDS9150626891506335-
GWHAAZE00000001CDS9150541091505474-
GWHAAZE00000001CDS9150514891505214-
GWHAAZE00000001CDS9150365491503941-
GWHAAZE00000001CDS9150344191503554-
GWHAAZE00000001CDS9150316191503190-
GWHAAZE00000001CDS9150281491503051-
GWHAAZE00000001CDS9150265391502686-
GWHAAZE00000001CDS9150182791501929-
GWHAAZE00000001CDS9149894691499028-
GWHAAZE00000001CDS9149688791497507-
GWHAAZE00000001CDS9149566191496153-
Transcript Sequence

Network for GWHGAAZE003074

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00117.29GATase2053386.00E-22
PF00117.29GATase3904241.70E-06
PF04715.14Anth_synt_I_N5446479.00E-11
PF00425.19Chorismate_bind7039613.70E-87
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K13950pabAB Folate biosynthesis map00790

Gene Ontology

GO term OntologyName
GO:0009058biological_processbiosynthetic process
GO:0009396biological_processfolic acid-containing compound biosynthetic process

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf5.937
SRR3591706second leaf10.022
SRR3591707mature leaf12.859
SRR3591708Shoot apex5.240
SRR3591709Stem3.696
SRR3591710White floral bud6.576
SRR3591711White flower10.263
SRR3591712Green floral bud8.713
SRR3591713Yellow flower8.135
SRP173429 SRR8316895Juvenile bud stage 4.240
SRR8316896Juvenile bud stage 4.768
SRR8316897Juvenile bud stage 2.889
SRR8316894Third green stage 2.645
SRR8316900Third green stage 6.741
SRR8316901Third green stage 7.938
SRR8316898Complete white stage 2.208
SRR8316899Complete white stage 5.937
SRR8316903Complete white stage 3.437
SRR8316902Silver flowering stage2.918
SRR8316904Silver flowering stage4.740
SRR8316905Silver flowering stage1.765
SRR8316906Gold flowering stage 8.645
SRR8316907Gold flowering stage 6.999
SRR8316908Gold flowering stage 6.791
SRP132670SRR6706286Control3.954
SRR6706287Light intensity 50%4.327
SRR6706288Light intensity 20%4.646
CNP0000432CNS0095592Slightly white alabastrum(diploid) 14.980
CNS0095593Slightly white alabastrum(diploid) 26.908
CNS0095594Slightly white alabastrum(diploid) 34.249
CNS0095595Whole white alabastrum(diploid) 26.139
CNS0095596Whole white alabastrum(diploid) 34.889
CNS0095597Whole white alabastrum(diploid) 44.509
CNS0095598Silvery flower (diploied) 16.746
CNS0095599Silvery flower (diploied) 24.527
CNS0095600Silvery flower (diploied) 37.861
CNS0095601Golden flower (diploid) 14.055
CNS0095602Golden flower (diploid) 27.232
CNS0095603Golden flower (diploid) 37.159
CNS0095604Slightly white alabastrum(tetraploid) 16.003
CNS0095605Slightly white alabastrum(tetraploid) 25.177
CNS0095606Slightly white alabastrum(tetraploid) 38.768
CNS0095607Whole white alabastrum(tetraploid) 15.245
CNS0095608Whole white alabastrum(tetraploid) 24.228
CNS0095609Whole white alabastrum(tetraploid) 38.316
CNS0095610Silvery flower (tetraploid) 111.225
CNS0095611Silvery flower (tetraploid) 29.714
CNS0095612Silvery flower (tetraploid) 36.904
CNS0095613Golden flower (tetraploid) 18.088
CNS0095614Golden flower (tetraploid) 211.315
CNS0095615Golden flower (tetraploid) 36.282
CRA001975CRR073297Stem 15.009
CRR073298Stem 24.349
CRR073299Stem 31.728
CRR073300Leaf 15.396
CRR073301Leaf 25.581
CRR073302Leaf 33.462
CRR073303Juvenile bud 14.325
CRR073304Juvenile bud 23.459
CRR073305Juvenile bud 32.972
CRR073306Third green 11.155
CRR073307Third green 20.521
CRR073308Third green 31.150
CRR073309Second white 11.376
CRR073310Second white 22.381
CRR073311Second white 33.627
CRR073312Silver flowering 12.514
CRR073313Silver flowering 21.793
CRR073314Silver flowering 34.123
CRR073315Gold flowering 13.383
CRR073316Gold flowering 27.008
CRR073317Gold flowering 31.163
CRR073318Tawny withering 13.403
CRR073319Tawny withering 23.804
CRR073320Tawny withering 31.609