Gene detail

Detail information of GWHGAAZE002959

Functional Annotation

Database	Orthologs	E value	Annotation
Nr	XP_007208313.1	6.3475E-125	hypothetical protein PRUPE_ppa003043mg [Prunus persica]
COG	YP_003339135.1	0.00000002	serine/threonine protein kinase-like protein
Swissprot	tr\|Q39183\|D6KL2_ARATH	3E-107	Serine/threonine-protein kinase D6PKL2
trEMBL	tr\|M1AGN1\|M1AGN1_SOLTU	2E-128	Uncharacterized protein {ECO:0000313\|EnsemblPlants:PGSC0003DMT400022399}
TAIR10	AT5G47750.1	7E-89	D6 protein kinase like 2

Location And Transcript Sequence (JBrowse)

Scaffold	Type	Start	End	Strand
GWHAAZE00000001	gene	89243974	89244867	-
GWHAAZE00000001	mRNA	89243974	89244867	-
GWHAAZE00000001	exon	89243974	89244867	-
GWHAAZE00000001	CDS	89243974	89244867	-

Transcript Sequence
>GWHTAAZE002963 ATGGCTTCAAAATCTGCTATGAAGAGTGCCCTTGAGAAGCATAGCAAATCAATTAGTACTCAACCATCAAAAGGACAATCTCGTATACCTTCACCTTTGCAGGTTTCAAATACGAGTAACTCAGAAGAAGTTTCATATCAGCAAAAGGAGTGTGCTGTATCGTTAGATGAAAAACTAGATTCAACCCTATCTCTGGATCACCCAAAACAAGTACCAACAACCAAAAGTTCTACAGTTAATGGTCTAACTGATCAACAAAAAACTCCATTGAATCAAGAAACTCTCAAGGACCGCTTGGTCTCTGCTAAAGTCAGCGATGGAGCCAGCAGCCTTGCAAAAACTAGCGGAGGTGCCAAAATTAGCGGTCGAGAGGACTATGTTGAGAGCGGCAAGAGCAGCATGTGTAGGGGTAGTACAAGCACCGACATAAGCGATGAAAGTACTTGTAGCAGCTTAAGCAGCTGTGTTAGCAAACCTCATAAAGCAAATGACTCGAGATGGGAAGCCATCCAAGCCGTTCGATCAAAAGATGGGGTTTTGGGTTTTAGCCATTTTAGATTGCTGAAGAAGCTGGGGTGTGGGGATATCGGCAGCGTCTATCTATCGGAGTTGAGTAGTACGAGGTGTTATTTTGCCATGAAGGTGATGGAGAAACAGTTGCTCGCAAGTCGTAAGAAGTTGCTTCGTGCTCAGACGGAAAGAGAGATACTTCAGTCTTTGGACCATCCCTTCCTTCCAACGTTATACACGCATTTTGAGACGGACAAGTTCTCTTGTTTGGTGATGGAGTTCTGCCCTGGAGGTGACTTGCACACACTTCGGCAGAGGCAGCCGGGGAAGCATTTTTCTGAACAAGCTGTAAAGTATTGCACTCTTCCCTTGCTCTTAATTTAA

Network for GWHGAAZE002959

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF00069.26	Pkinase	186	290	2.00E-16

Protein Sequence

Gene family

Gene family	subfamily
Protein Kinases Family	AGC_RSK-2

KEGG pathway

KO	Enzyme	pathway	mapID
--	--	--	--

Gene Ontology

GO term	Ontology	Name
GO:0006468	biological_process	protein phosphorylation
GO:0004672	molecular_function	protein kinase activity
GO:0005524	molecular_function	ATP binding

Expression pattern

Expression pattern detail

SRP	Sample	Description	TPM
SRP075780	SRR3591705	youngest leaf	70.277
	SRR3591706	second leaf	45.447
	SRR3591707	mature leaf	31.454
	SRR3591708	Shoot apex	56.638
	SRR3591709	Stem	84.361
	SRR3591710	White floral bud	73.338
	SRR3591711	White flower	62.649
	SRR3591712	Green floral bud	59.771
	SRR3591713	Yellow flower	39.590
SRP173429	SRR8316895	Juvenile bud stage	34.305
	SRR8316896	Juvenile bud stage	50.757
	SRR8316897	Juvenile bud stage	24.869
	SRR8316894	Third green stage	22.535
	SRR8316900	Third green stage	62.477
	SRR8316901	Third green stage	58.922
	SRR8316898	Complete white stage	30.624
	SRR8316899	Complete white stage	101.320
	SRR8316903	Complete white stage	54.845
	SRR8316902	Silver flowering stage	16.896
	SRR8316904	Silver flowering stage	24.119
	SRR8316905	Silver flowering stage	10.811
	SRR8316906	Gold flowering stage	24.370
	SRR8316907	Gold flowering stage	22.526
	SRR8316908	Gold flowering stage	20.072
SRP132670	SRR6706286	Control	69.625
	SRR6706287	Light intensity 50%	79.518
	SRR6706288	Light intensity 20%	78.704
CNP0000432	CNS0095592	Slightly white alabastrum(diploid) 1	30.782
	CNS0095593	Slightly white alabastrum(diploid) 2	27.911
	CNS0095594	Slightly white alabastrum(diploid) 3	24.574
	CNS0095595	Whole white alabastrum(diploid) 2	23.665
	CNS0095596	Whole white alabastrum(diploid) 3	19.841
	CNS0095597	Whole white alabastrum(diploid) 4	26.595
	CNS0095598	Silvery flower (diploied) 1	36.301
	CNS0095599	Silvery flower (diploied) 2	23.284
	CNS0095600	Silvery flower (diploied) 3	50.273
	CNS0095601	Golden flower (diploid) 1	24.952
	CNS0095602	Golden flower (diploid) 2	39.403
	CNS0095603	Golden flower (diploid) 3	36.872
	CNS0095604	Slightly white alabastrum(tetraploid) 1	33.707
	CNS0095605	Slightly white alabastrum(tetraploid) 2	25.500
	CNS0095606	Slightly white alabastrum(tetraploid) 3	82.810
	CNS0095607	Whole white alabastrum(tetraploid) 1	22.752
	CNS0095608	Whole white alabastrum(tetraploid) 2	18.158
	CNS0095609	Whole white alabastrum(tetraploid) 3	52.813
	CNS0095610	Silvery flower (tetraploid) 1	35.008
	CNS0095611	Silvery flower (tetraploid) 2	35.038
	CNS0095612	Silvery flower (tetraploid) 3	58.667
	CNS0095613	Golden flower (tetraploid) 1	10.434
	CNS0095614	Golden flower (tetraploid) 2	22.434
	CNS0095615	Golden flower (tetraploid) 3	9.643
CRA001975	CRR073297	Stem 1	73.543
	CRR073298	Stem 2	66.563
	CRR073299	Stem 3	65.815
	CRR073300	Leaf 1	98.127
	CRR073301	Leaf 2	92.826
	CRR073302	Leaf 3	69.101
	CRR073303	Juvenile bud 1	87.727
	CRR073304	Juvenile bud 2	97.141
	CRR073305	Juvenile bud 3	122.129
	CRR073306	Third green 1	92.508
	CRR073307	Third green 2	88.803
	CRR073308	Third green 3	81.554
	CRR073309	Second white 1	31.073
	CRR073310	Second white 2	25.928
	CRR073311	Second white 3	19.826
	CRR073312	Silver flowering 1	15.652
	CRR073313	Silver flowering 2	15.549
	CRR073314	Silver flowering 3	13.429
	CRR073315	Gold flowering 1	38.311
	CRR073316	Gold flowering 2	59.625
	CRR073317	Gold flowering 3	43.771
	CRR073318	Tawny withering 1	57.723
	CRR073319	Tawny withering 2	47.151
	CRR073320	Tawny withering 3	60.925