Detail information of GWHGAAZE002694


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrCAN70797.10hypothetical protein VITISV_011590 [Vitis vinifera]
COGYP_005842606.14E-47AAA ATPase
Swissprottr|Q9M0Y8|NSF_ARATH0Vesicle-fusing ATPase
trEMBLtr|A5C0W8|A5C0W8_VITVI0Putative uncharacterized protein {ECO:0000313|EMBL:CAN70797.1}
TAIR10AT4G04910.10AAA-type ATPase family protein

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000001gene8438362184388381-
GWHAAZE00000001mRNA8438362184388381-
GWHAAZE00000001exon8438822984388381-
GWHAAZE00000001exon8438732584387455-
GWHAAZE00000001exon8438716584387246-
GWHAAZE00000001exon8438612684386323-
GWHAAZE00000001exon8438586984386023-
GWHAAZE00000001exon8438565484385762-
GWHAAZE00000001exon8438457484384673-
GWHAAZE00000001exon8438442384384478-
GWHAAZE00000001exon8438410684384171-
GWHAAZE00000001exon8438393084384012-
GWHAAZE00000001exon8438362184383786-
GWHAAZE00000001CDS8438822984388381-
GWHAAZE00000001CDS8438732584387455-
GWHAAZE00000001CDS8438716584387246-
GWHAAZE00000001CDS8438612684386323-
GWHAAZE00000001CDS8438586984386023-
GWHAAZE00000001CDS8438565484385762-
GWHAAZE00000001CDS8438457484384673-
GWHAAZE00000001CDS8438442384384478-
GWHAAZE00000001CDS8438410684384171-
GWHAAZE00000001CDS8438393084384012-
GWHAAZE00000001CDS8438362184383786-
Transcript Sequence

Network for GWHGAAZE002694

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00004.30AAA2493899.00E-40
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K06027NSF, SEC18 Autophagy - yeast map04138
Vasopressin-regulated water reabsorptionmap04962
GABAergic synapsemap04727
Synaptic vesicle cyclemap04721

Gene Ontology

GO term OntologyName
GO:0005524molecular_functionATP binding

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf74.261
SRR3591706second leaf26.794
SRR3591707mature leaf11.557
SRR3591708Shoot apex29.815
SRR3591709Stem50.511
SRR3591710White floral bud37.387
SRR3591711White flower38.078
SRR3591712Green floral bud42.821
SRR3591713Yellow flower33.852
SRP173429 SRR8316895Juvenile bud stage 27.683
SRR8316896Juvenile bud stage 44.821
SRR8316897Juvenile bud stage 24.084
SRR8316894Third green stage 19.274
SRR8316900Third green stage 45.126
SRR8316901Third green stage 43.222
SRR8316898Complete white stage 18.027
SRR8316899Complete white stage 43.512
SRR8316903Complete white stage 24.989
SRR8316902Silver flowering stage12.289
SRR8316904Silver flowering stage19.311
SRR8316905Silver flowering stage9.670
SRR8316906Gold flowering stage 30.200
SRR8316907Gold flowering stage 26.458
SRR8316908Gold flowering stage 28.801
SRP132670SRR6706286Control31.231
SRR6706287Light intensity 50%34.638
SRR6706288Light intensity 20%36.368
CNP0000432CNS0095592Slightly white alabastrum(diploid) 119.036
CNS0095593Slightly white alabastrum(diploid) 216.469
CNS0095594Slightly white alabastrum(diploid) 320.498
CNS0095595Whole white alabastrum(diploid) 219.626
CNS0095596Whole white alabastrum(diploid) 315.265
CNS0095597Whole white alabastrum(diploid) 414.859
CNS0095598Silvery flower (diploied) 118.126
CNS0095599Silvery flower (diploied) 218.074
CNS0095600Silvery flower (diploied) 335.114
CNS0095601Golden flower (diploid) 111.957
CNS0095602Golden flower (diploid) 230.244
CNS0095603Golden flower (diploid) 330.127
CNS0095604Slightly white alabastrum(tetraploid) 125.007
CNS0095605Slightly white alabastrum(tetraploid) 216.762
CNS0095606Slightly white alabastrum(tetraploid) 344.500
CNS0095607Whole white alabastrum(tetraploid) 117.939
CNS0095608Whole white alabastrum(tetraploid) 219.117
CNS0095609Whole white alabastrum(tetraploid) 341.125
CNS0095610Silvery flower (tetraploid) 125.447
CNS0095611Silvery flower (tetraploid) 223.835
CNS0095612Silvery flower (tetraploid) 323.538
CNS0095613Golden flower (tetraploid) 18.925
CNS0095614Golden flower (tetraploid) 218.659
CNS0095615Golden flower (tetraploid) 322.544
CRA001975CRR073297Stem 132.929
CRR073298Stem 234.141
CRR073299Stem 327.391
CRR073300Leaf 138.358
CRR073301Leaf 232.863
CRR073302Leaf 328.768
CRR073303Juvenile bud 134.243
CRR073304Juvenile bud 227.945
CRR073305Juvenile bud 340.909
CRR073306Third green 117.103
CRR073307Third green 215.523
CRR073308Third green 317.457
CRR073309Second white 111.735
CRR073310Second white 216.175
CRR073311Second white 316.141
CRR073312Silver flowering 118.536
CRR073313Silver flowering 218.728
CRR073314Silver flowering 319.868
CRR073315Gold flowering 19.644
CRR073316Gold flowering 211.685
CRR073317Gold flowering 38.497
CRR073318Tawny withering 126.246
CRR073319Tawny withering 217.161
CRR073320Tawny withering 324.974