Detail information of GWHGAAZE002631


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrAAF27931.1AF222805_13.9099E-14914-3-3-like protein [Euphorbia esula]
Swissprottr|Q96453|1433D_SOYBN6E-14214-3-3-like protein D
trEMBLtr|Q9M5W3|Q9M5W3_EUPES1E-14914-3-3-like protein {ECO:0000313|EMBL:AAF27931.1}
TAIR10AT2G42590.38E-106general regulatory factor 9

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000001gene8312625983128115+
GWHAAZE00000001mRNA8312625983128115+
GWHAAZE00000001exon8312625983126563+
GWHAAZE00000001exon8312666383126750+
GWHAAZE00000001exon8312773683127845+
GWHAAZE00000001exon8312792683128115+
GWHAAZE00000001CDS8312625983126563+
GWHAAZE00000001CDS8312666383126750+
GWHAAZE00000001CDS8312773683127845+
GWHAAZE00000001CDS8312792683128115+
Transcript Sequence

Network for GWHGAAZE002631

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00244.212014/3/312102.50E-98
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K06630YWHAE MAPK signaling pathway - yeast map04011
Hippo signaling pathwaymap04390
Hippo signaling pathway - flymap04391
PI3K-Akt signaling pathwaymap04151
Cell cyclemap04110
Oocyte meiosismap04114
NOD-like receptor signaling pathwaymap04621
Neurotrophin signaling pathwaymap04722

Gene Ontology

GO term OntologyName
GO:0019904molecular_functionprotein domain specific binding

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf230.946
SRR3591706second leaf141.275
SRR3591707mature leaf109.679
SRR3591708Shoot apex197.477
SRR3591709Stem128.831
SRR3591710White floral bud85.145
SRR3591711White flower104.657
SRR3591712Green floral bud150.283
SRR3591713Yellow flower95.466
SRP173429 SRR8316895Juvenile bud stage 75.094
SRR8316896Juvenile bud stage 100.895
SRR8316897Juvenile bud stage 47.032
SRR8316894Third green stage 46.822
SRR8316900Third green stage 142.881
SRR8316901Third green stage 141.834
SRR8316898Complete white stage 45.739
SRR8316899Complete white stage 181.353
SRR8316903Complete white stage 59.975
SRR8316902Silver flowering stage38.178
SRR8316904Silver flowering stage39.855
SRR8316905Silver flowering stage24.019
SRR8316906Gold flowering stage 83.223
SRR8316907Gold flowering stage 68.755
SRR8316908Gold flowering stage 80.586
SRP132670SRR6706286Control235.718
SRR6706287Light intensity 50%216.878
SRR6706288Light intensity 20%224.751
CNP0000432CNS0095592Slightly white alabastrum(diploid) 1105.381
CNS0095593Slightly white alabastrum(diploid) 2106.085
CNS0095594Slightly white alabastrum(diploid) 374.865
CNS0095595Whole white alabastrum(diploid) 288.832
CNS0095596Whole white alabastrum(diploid) 397.164
CNS0095597Whole white alabastrum(diploid) 486.530
CNS0095598Silvery flower (diploied) 180.389
CNS0095599Silvery flower (diploied) 277.784
CNS0095600Silvery flower (diploied) 3116.398
CNS0095601Golden flower (diploid) 174.658
CNS0095602Golden flower (diploid) 2115.215
CNS0095603Golden flower (diploid) 3108.038
CNS0095604Slightly white alabastrum(tetraploid) 1138.963
CNS0095605Slightly white alabastrum(tetraploid) 2113.775
CNS0095606Slightly white alabastrum(tetraploid) 3242.776
CNS0095607Whole white alabastrum(tetraploid) 175.830
CNS0095608Whole white alabastrum(tetraploid) 274.356
CNS0095609Whole white alabastrum(tetraploid) 3149.615
CNS0095610Silvery flower (tetraploid) 1128.565
CNS0095611Silvery flower (tetraploid) 2137.090
CNS0095612Silvery flower (tetraploid) 381.912
CNS0095613Golden flower (tetraploid) 186.889
CNS0095614Golden flower (tetraploid) 2112.322
CNS0095615Golden flower (tetraploid) 369.131
CRA001975CRR073297Stem 1165.045
CRR073298Stem 2168.963
CRR073299Stem 3172.365
CRR073300Leaf 1183.615
CRR073301Leaf 2168.997
CRR073302Leaf 3230.006
CRR073303Juvenile bud 1221.606
CRR073304Juvenile bud 2205.504
CRR073305Juvenile bud 3208.933
CRR073306Third green 135.249
CRR073307Third green 237.217
CRR073308Third green 335.138
CRR073309Second white 157.147
CRR073310Second white 236.370
CRR073311Second white 320.398
CRR073312Silver flowering 123.820
CRR073313Silver flowering 234.675
CRR073314Silver flowering 321.354
CRR073315Gold flowering 1120.963
CRR073316Gold flowering 2123.030
CRR073317Gold flowering 3118.866
CRR073318Tawny withering 1189.094
CRR073319Tawny withering 2128.064
CRR073320Tawny withering 3194.624