Detail information of GWHGAAZE002603


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrXP_007211339.10hypothetical protein PRUPE_ppa001122mg [Prunus persica]
COGYP_001958461.14E-25hypothetical protein Aasi_1443
Swissprottr|C0LGG7|Y1534_ARATH6E-156Probable LRR receptor-like serine/threonine-protein kinase At1g53420 (Precursor)
trEMBLtr|M5WTB1|M5WTB1_PRUPE0Uncharacterized protein {ECO:0000313|EMBL:EMJ12538.1}
TAIR10AT1G53420.11E-128Leucine-rich repeat transmembrane protein kinase

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000001gene8252764982543802-
GWHAAZE00000001mRNA8252764982543802-
GWHAAZE00000001exon8252764982528180-
GWHAAZE00000001exon8252838782528534-
GWHAAZE00000001exon8252871582528952-
GWHAAZE00000001exon8252907582529285-
GWHAAZE00000001exon8252940882529526-
GWHAAZE00000001exon8252966882529741-
GWHAAZE00000001exon8253099782531288-
GWHAAZE00000001exon8253185982531899-
GWHAAZE00000001exon8253204182532076-
GWHAAZE00000001exon8253216682532231-
GWHAAZE00000001exon8253322782533301-
GWHAAZE00000001exon8253339182533462-
GWHAAZE00000001exon8253354882533619-
GWHAAZE00000001exon8253371582533786-
GWHAAZE00000001exon8253387082533941-
GWHAAZE00000001exon8253406282534133-
GWHAAZE00000001exon8253622082536291-
GWHAAZE00000001exon8253639282536456-
GWHAAZE00000001exon8253703482537119-
GWHAAZE00000001exon8254370082543802-
GWHAAZE00000001five_prime_UTR8254378882543802-
GWHAAZE00000001CDS8254370082543787-
GWHAAZE00000001CDS8253703482537119-
GWHAAZE00000001CDS8253639282536456-
GWHAAZE00000001CDS8253622082536291-
GWHAAZE00000001CDS8253406282534133-
GWHAAZE00000001CDS8253387082533941-
GWHAAZE00000001CDS8253371582533786-
GWHAAZE00000001CDS8253354882533619-
GWHAAZE00000001CDS8253339182533462-
GWHAAZE00000001CDS8253322782533301-
GWHAAZE00000001CDS8253216682532231-
GWHAAZE00000001CDS8253204182532076-
GWHAAZE00000001CDS8253185982531899-
GWHAAZE00000001CDS8253099782531288-
GWHAAZE00000001CDS8252966882529741-
GWHAAZE00000001CDS8252940882529526-
GWHAAZE00000001CDS8252907582529285-
GWHAAZE00000001CDS8252871582528952-
GWHAAZE00000001CDS8252838782528534-
GWHAAZE00000001CDS8252778282528180-
GWHAAZE00000001three_prime_UTR8252764982527781-
Transcript Sequence

Network for GWHGAAZE002603

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF11721.9Malectin3003863.40E-06
PF07714.18PK_Tyr_Ser-Thr4457123.00E-47
Protein Sequence

Gene family

Gene familysubfamily
Protein Kinases FamilyRLK-Pelle_DLSV

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0006468biological_processprotein phosphorylation
GO:0004672molecular_functionprotein kinase activity
GO:0005524molecular_functionATP binding

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf5.749
SRR3591706second leaf3.059
SRR3591707mature leaf3.683
SRR3591708Shoot apex4.278
SRR3591709Stem7.057
SRR3591710White floral bud7.546
SRR3591711White flower9.428
SRR3591712Green floral bud4.146
SRR3591713Yellow flower1.327
SRP173429 SRR8316895Juvenile bud stage 5.709
SRR8316896Juvenile bud stage 6.536
SRR8316897Juvenile bud stage 3.088
SRR8316894Third green stage 2.967
SRR8316900Third green stage 5.771
SRR8316901Third green stage 4.823
SRR8316898Complete white stage 1.781
SRR8316899Complete white stage 9.826
SRR8316903Complete white stage 4.541
SRR8316902Silver flowering stage0.614
SRR8316904Silver flowering stage0.624
SRR8316905Silver flowering stage0.328
SRR8316906Gold flowering stage 1.604
SRR8316907Gold flowering stage 1.003
SRR8316908Gold flowering stage 1.198
SRP132670SRR6706286Control4.531
SRR6706287Light intensity 50%5.136
SRR6706288Light intensity 20%4.827
CNP0000432CNS0095592Slightly white alabastrum(diploid) 18.985
CNS0095593Slightly white alabastrum(diploid) 28.849
CNS0095594Slightly white alabastrum(diploid) 37.144
CNS0095595Whole white alabastrum(diploid) 25.822
CNS0095596Whole white alabastrum(diploid) 36.045
CNS0095597Whole white alabastrum(diploid) 45.486
CNS0095598Silvery flower (diploied) 18.348
CNS0095599Silvery flower (diploied) 29.204
CNS0095600Silvery flower (diploied) 32.786
CNS0095601Golden flower (diploid) 18.314
CNS0095602Golden flower (diploid) 24.331
CNS0095603Golden flower (diploid) 34.034
CNS0095604Slightly white alabastrum(tetraploid) 13.500
CNS0095605Slightly white alabastrum(tetraploid) 22.889
CNS0095606Slightly white alabastrum(tetraploid) 30.374
CNS0095607Whole white alabastrum(tetraploid) 13.343
CNS0095608Whole white alabastrum(tetraploid) 21.119
CNS0095609Whole white alabastrum(tetraploid) 30.794
CNS0095610Silvery flower (tetraploid) 10.111
CNS0095611Silvery flower (tetraploid) 20.282
CNS0095612Silvery flower (tetraploid) 30.433
CNS0095613Golden flower (tetraploid) 10.304
CNS0095614Golden flower (tetraploid) 20.228
CNS0095615Golden flower (tetraploid) 30.112
CRA001975CRR073297Stem 16.071
CRR073298Stem 25.663
CRR073299Stem 33.613
CRR073300Leaf 15.700
CRR073301Leaf 23.875
CRR073302Leaf 32.903
CRR073303Juvenile bud 13.378
CRR073304Juvenile bud 22.175
CRR073305Juvenile bud 34.408
CRR073306Third green 10.233
CRR073307Third green 20.157
CRR073308Third green 30.345
CRR073309Second white 10.164
CRR073310Second white 20.120
CRR073311Second white 30.083
CRR073312Silver flowering 10.249
CRR073313Silver flowering 20.212
CRR073314Silver flowering 30.023
CRR073315Gold flowering 13.455
CRR073316Gold flowering 26.508
CRR073317Gold flowering 32.246
CRR073318Tawny withering 13.701
CRR073319Tawny withering 24.541
CRR073320Tawny withering 32.405