Detail information of GWHGAAZE002522


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrCDP06120.10unnamed protein product [Coffea canephora]
Swissprottr|Q9C7S7|ERO1_ARATH0Endoplasmic reticulum oxidoreductin-1 (Precursor)
trEMBLtr|A0A068UC32|A0A068UC32_COFCA0Coffea canephora DH200=94 genomic scaffold, scaffold_19 {ECO:0000313|EMBL:CDP06120.1}
TAIR10AT1G72280.10endoplasmic reticulum oxidoreductins 1

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000001gene8053460380538242-
GWHAAZE00000001mRNA8053460380538242-
GWHAAZE00000001exon8053813280538242-
GWHAAZE00000001exon8053706280537320-
GWHAAZE00000001exon8053684480536954-
GWHAAZE00000001exon8053630180536419-
GWHAAZE00000001exon8053600980536113-
GWHAAZE00000001exon8053570280535904-
GWHAAZE00000001exon8053502880535151-
GWHAAZE00000001exon8053471780534898-
GWHAAZE00000001exon8053460380534624-
GWHAAZE00000001CDS8053813280538242-
GWHAAZE00000001CDS8053706280537320-
GWHAAZE00000001CDS8053684480536954-
GWHAAZE00000001CDS8053630180536419-
GWHAAZE00000001CDS8053600980536113-
GWHAAZE00000001CDS8053570280535904-
GWHAAZE00000001CDS8053502880535151-
GWHAAZE00000001CDS8053471780534898-
GWHAAZE00000001CDS8053460380534624-
Transcript Sequence

Network for GWHGAAZE002522

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF04137.16ERO1203693.30E-126
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K10950ERO1L Protein processing in endoplasmic reticulum map04141

Gene Ontology

GO term OntologyName
GO:0055114biological_processoxidation-reduction process
GO:0005783cellular_componentendoplasmic reticulum
GO:0003756molecular_functionprotein disulfide isomerase activity
GO:0016671molecular_functionoxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf41.567
SRR3591706second leaf15.845
SRR3591707mature leaf8.867
SRR3591708Shoot apex22.729
SRR3591709Stem23.096
SRR3591710White floral bud23.580
SRR3591711White flower24.017
SRR3591712Green floral bud24.128
SRR3591713Yellow flower40.563
SRP173429 SRR8316895Juvenile bud stage 31.744
SRR8316896Juvenile bud stage 33.070
SRR8316897Juvenile bud stage 27.584
SRR8316894Third green stage 10.790
SRR8316900Third green stage 32.214
SRR8316901Third green stage 34.741
SRR8316898Complete white stage 15.831
SRR8316899Complete white stage 44.399
SRR8316903Complete white stage 20.492
SRR8316902Silver flowering stage12.512
SRR8316904Silver flowering stage16.225
SRR8316905Silver flowering stage6.550
SRR8316906Gold flowering stage 24.891
SRR8316907Gold flowering stage 15.153
SRR8316908Gold flowering stage 19.897
SRP132670SRR6706286Control20.362
SRR6706287Light intensity 50%22.021
SRR6706288Light intensity 20%20.912
CNP0000432CNS0095592Slightly white alabastrum(diploid) 130.459
CNS0095593Slightly white alabastrum(diploid) 232.341
CNS0095594Slightly white alabastrum(diploid) 331.444
CNS0095595Whole white alabastrum(diploid) 229.021
CNS0095596Whole white alabastrum(diploid) 323.635
CNS0095597Whole white alabastrum(diploid) 417.819
CNS0095598Silvery flower (diploied) 141.650
CNS0095599Silvery flower (diploied) 240.705
CNS0095600Silvery flower (diploied) 330.020
CNS0095601Golden flower (diploid) 140.781
CNS0095602Golden flower (diploid) 248.110
CNS0095603Golden flower (diploid) 346.574
CNS0095604Slightly white alabastrum(tetraploid) 118.598
CNS0095605Slightly white alabastrum(tetraploid) 220.760
CNS0095606Slightly white alabastrum(tetraploid) 330.535
CNS0095607Whole white alabastrum(tetraploid) 121.176
CNS0095608Whole white alabastrum(tetraploid) 220.481
CNS0095609Whole white alabastrum(tetraploid) 322.288
CNS0095610Silvery flower (tetraploid) 123.348
CNS0095611Silvery flower (tetraploid) 218.225
CNS0095612Silvery flower (tetraploid) 321.628
CNS0095613Golden flower (tetraploid) 116.596
CNS0095614Golden flower (tetraploid) 220.921
CNS0095615Golden flower (tetraploid) 321.785
CRA001975CRR073297Stem 125.616
CRR073298Stem 219.810
CRR073299Stem 317.886
CRR073300Leaf 129.227
CRR073301Leaf 224.000
CRR073302Leaf 324.056
CRR073303Juvenile bud 122.119
CRR073304Juvenile bud 217.439
CRR073305Juvenile bud 323.262
CRR073306Third green 115.256
CRR073307Third green 212.055
CRR073308Third green 318.628
CRR073309Second white 111.811
CRR073310Second white 29.056
CRR073311Second white 39.627
CRR073312Silver flowering 121.972
CRR073313Silver flowering 226.729
CRR073314Silver flowering 328.973
CRR073315Gold flowering 111.655
CRR073316Gold flowering 217.721
CRR073317Gold flowering 39.389
CRR073318Tawny withering 131.140
CRR073319Tawny withering 240.694
CRR073320Tawny withering 349.976